| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is imp [H]
Identifier: 161484744
GI number: 161484744
Start: 4090134
End: 4092476
Strand: Direct
Name: imp [H]
Synonym: y3680
Alternate gene names: 161484744
Gene position: 4090134-4092476 (Clockwise)
Preceding gene: 22127552
Following gene: 22127555
Centisome position: 88.9
GC content: 47.84
Gene sequence:
>2343_bases ATGAAAAAAAGATTCCCAACACTGCTGGCCACATTGATTTGGACGGCACTATATAGTCAACACACACTGGCAGACCTTGC GGAGCAATGTATGCTCGGTGTCCCAACCTATGATCAACCACTGGTCACAGGCGATCCGAATCAACTGCCGGTCCGTATTA ATGCGGATAAAACCGAAGCAAACTATCCGGATAATGCCTTGTTTACTGGCAATGTTATTGTTCAGCAAGGCAATAGCACC CTAACAGCGAACCAAGTGGAACTGACACAGGTACAGAAACCCGGTGAAGTCATTCCCCTTCGTACCGTTACCGCCACCGG CGATGTCAACTACGACGATCCGCAAATCAAGCTGAAAGGACCAAAAGGTTGGTCAAATCTGAACACCAAAGATACTGATA TGGACAAAGGTAAATATCAGATGGTGGGCCGTCAGGGCCGTGGTGATGCAGATTTGATGAAATTGCGCGATCAGAGCCGC TACACCATTTTGAAAAACGGCACATTTACCTCTTGCCTACCCGGAGATAACAGTTGGAGCGTGGTTGGCTCAGAGGTCAT TCATGACCGCGAAGAACAAGTGGTTGAAGTTTGGAATGCTCGTTTCAAGATTGGCAAAGTCCCGGTGTTTTACAGCCCTT ATATGCAATTGCCAGTTGGCGATAAACGCCGTTCGGGGTTCTTGATCCCAAATGCGAAATTTACCAGTAACAATGGTTTT GAGTTTTTACTCCCTTATTACTGGAATATTGCCCCCAACTTTGATGCCACCATTACGCCACACTATATGGAAAGGCGCGG GTTGCAATGGCAAAACGAATTCCGCTATTTGCTGGCGCCGGGTTCAGGCACCATGGCATTAGACTGGTTGCCCAATGACC GTATCTATACGGGGCCTGATGGCACAGATAAAAATGCCACCCGCTGGTTATACTACTGGGGCCATTCCGGTGTAATGGAT CAAGTTTGGCGCTTCAACATCAACTATACCCGTGTCAGCGACCCCGCTTACTTTACGGATTTAACCTCTCAGTACGGTTC GACAACCGATGGCTACGCGACACAAATATTCACCGCCGGTTATGCCAATGAAAACTGGAATGCGACGCTGTCTTCCAAGC AGTTCCAGGTATTTACTGCTGCAGGTAACAGTAATGCCTACCGTGCCCAGCCACAGTTGGACATGAACTACTACAAAAAC GATGTTGGTCCATTTGATATGCATGTCTATGGTCAGGCGGCCAAATTCACCAGTGTCAATCCAACTAACCCGGAAGCCAG CCGTTTCCATATTGAACCTACGGTTAACCTGCCCTTATCCAATAGCTGGGGAAGCATAAATACAGAAGCCAAACTGTTGG CCACCCACTATCAACAGGATATTCCGGCCAGTTTTGCTGACAATGCTAGCAACCCCAAACTGAAAGACTCAGTAAACCGG GTCCTACCACAGTTTAAAGTGGATGGTAAGGTGGTATTCGATAGGTCAATGGACTGGGCGACGGGCTTTACGCAGACATT GGAGCCTCGCGCACAGTATCTCTACGTCCCTTACCGGAACCAAGATGATATCTATATATACGACACCACGTTGATGCAGT CGGATTACTCTGGTCTGTTCCGTGATCGTACCTATAGTGGCTTGGACCGTATTGCATCGGCTAATCAGGTATCTACCGGT TTAACCTCTCGCATATATGATGATGCTCGGGTTGAACGTTTTAATGTCTCTGTAGGTCAAATCTATTACTTCAGTCGATC ACGCACAGGTAATACCGAAGCCATCGATAACAGTAACGCGACAGGAAGCCTGGTTTGGGCTGGTGATACTTTTTGGCGGA TCAACGATCAACTGGGCCTGAAGGGCGGTGCACAGTATGATACGCGGCTGGGAAGTTTGACCTTAGGTAACGCTATAATG GAATATAGAAAAGACGCTGATCGTATGATTCAATTGAATTATCGCTACGCGAGCCCAAAATATATTCAGGCTGCTGTCCC TAAAGTATACAACCCTGACTACCAGCAAGGCATCTCTCAGGTAGGTACCACGGCCAGTTGGCCAATTGCTGACCGCTGGG CGATCGTCGGGGCGTATTATTACGATACCAAAGCCAAACAACCTGCCAGCCAGTTAGTTGGCTTGCAATACAACACCTGT TGTTGGGCGGTAAACCTTGGCTATGAACGCAAAATAACTGGCTGGAATGCACAAGGCCAAACCAGTAAGTACGACAACAA AATAGGCTTTAACATCGAATTACGTGGTTTGAGCGGTGGTCATAGCCTTGGTACTGCTCAAATGCTGAACTCGGGCATTC TGCCTTATCAAAGTGCATTCTGA
Upstream 100 bases:
>100_bases AAACGGCCAGATTTAACACTAGCGCAACTGTGATGAGTGATATAGTCTCAAACCGTTTGCCGGCATGATGCCCCCCGATG ACGGAACACCAAAACCACGT
Downstream 100 bases:
>100_bases TACTGTTTAACACACTGAATACAGTGAATCTTAACCCGCGATAGCGGATTACATAAATGGAAAAGGTATGAAGAACTGGA GAACGCTTATTCTCGGATTG
Product: organic solvent tolerance protein
Products: NA
Alternate protein names: Organic solvent tolerance protein [H]
Number of amino acids: Translated: 780; Mature: 780
Protein sequence:
>780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNATGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRKDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF
Sequences:
>Translated_780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNATGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRKDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF >Mature_780_residues MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNST LTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRDQSR YTILKNGTFTSCLPGDNSWSVVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPDGTDKNATRWLYYWGHSGVMD QVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKN DVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTG LTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNATGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIM EYRKDADRMIQLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF
Specific function: Together with lptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis [H]
COG id: COG1452
COG function: function code M; Organic solvent tolerance protein OstA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptD family [H]
Homologues:
Organism=Escherichia coli, GI1786239, Length=786, Percent_Identity=66.5394402035623, Blast_Score=1102, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020889 - InterPro: IPR005653 - InterPro: IPR007543 [H]
Pfam domain/function: PF03968 OstA; PF04453 OstA_C [H]
EC number: NA
Molecular weight: Translated: 87910; Mature: 87910
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCCCCC NYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKG CCCCCEEEECEEEEECCCCEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC PKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRDQSRYTILKNGTFTSCLPGDNSWS CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCCE VVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EECHHHHHCHHHHHHHHHCCEEEECCCEEEECCEEECCCCCCCCCCEECCCCEEECCCCC EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPD EEEEEEEEECCCCCCCEECCHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCC GTDKNATRWLYYWGHSGVMDQVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAG CCCCCCEEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEC YANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKNDVGPFDMHVYGQAAKFTSVN CCCCCCCEEECCCEEEEEEEECCCCCEECCCCCCHHHHHCCCCCEEEEEEECCEEECCCC PTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR CCCCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLF HCCCEECCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHH RDRTYSGLDRIASANQVSTGLTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNA HCCCHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCCCCC TGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIMEYRKDADRMIQLNYRYASPK CEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCC YIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEECCE CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF EEEEECCCEEEECCCCCCCCCCCCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEECCCCCC NYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEVIPLRTVTATGDVNYDDPQIKLKG CCCCCEEEECEEEEECCCCEEEECEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC PKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRDQSRYTILKNGTFTSCLPGDNSWS CCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEECCCEEEECCCCCCCE VVGSEVIHDREEQVVEVWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKFTSNNGF EECHHHHHCHHHHHHHHHCCEEEECCCEEEECCEEECCCCCCCCCCEECCCCEEECCCCC EFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDRIYTGPD EEEEEEEEECCCCCCCEECCHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCC GTDKNATRWLYYWGHSGVMDQVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAG CCCCCCEEEEEEECCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEC YANENWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKNDVGPFDMHVYGQAAKFTSVN CCCCCCCEEECCCEEEEEEEECCCCCEECCCCCCHHHHHCCCCCEEEEEEECCEEECCCC PTNPEASRFHIEPTVNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNR CCCCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHH VLPQFKVDGKVVFDRSMDWATGFTQTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLF HCCCEECCCEEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHH RDRTYSGLDRIASANQVSTGLTSRIYDDARVERFNVSVGQIYYFSRSRTGNTEAIDNSNA HCCCHHHHHHHHCCCHHHHCHHHHHHCCCCEEEEECEEEEEEEEECCCCCCCCCCCCCCC TGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIMEYRKDADRMIQLNYRYASPK CEEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCC YIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC HHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEECCE CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIELRGLSGGHSLGTAQMLNSGILPYQSAF EEEEECCCEEEECCCCCCCCCCCCCCEECEEEEEEECCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA