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The map label for this gene is ycfX [C]

Identifier: 21910828

GI number: 21910828

Start: 1299737

End: 1300615

Strand: Direct

Name: ycfX [C]

Synonym: SpyM3_1292

Alternate gene names: 21910828

Gene position: 1299737-1300615 (Clockwise)

Preceding gene: 21910816

Following gene: 21910832

Centisome position: 68.39

GC content: 44.6

Gene sequence:

>879_bases
ATGAGCTTGTTATGTATTGATATAGGAGGCACTTCCCTTAAATTTGCCCTCTGTCACAATGGCCAATTAAGCCAGCAAAG
CAGCTTTCCCACTCCCTCTAGTCTGGAAAAGTTTTACCAATTACTCGACCAAGAAGTTGCTCGTTACTCTGCTTACCATT
TCTCAGGTATTGCCATCAGTTCACCTGGGGCAGTCAATAAAGAAAAGGGGGTTATCGAAGGCGCCAGCGCTATTCCCTAC
ATTCACCATTTTAAAATACAAGAGGCCTTAGAAGAACGGCTACATTACCCTATTTCTATCGAAAATGATGCCAATTGTGC
CGCCTTAGCTGAAGCTACCTTAGGGGCAGGAAAAGGCGCTAGTAGCCTAGCCATGCTCGTTATTGGTACTGGAGTTGGAG
GAAGCTTGGTCATTGATGGCAAGATTTACCATGGTGCCCACTTATTTGGGGGCGAATTTGGTTTCATGATCATGAACGAC
CGCTACCAAACCTTTAGTCAATTAGGCACTGTTGTGAATATGGCCAAGCGCTATAGTGCAATCGTCAATAACGGAAAAGA
TTATACTGGCAAAGCTGTCCTTGCCCTCACAGAACAAGGAGATCCCCTAGCACTCAAAGAAAGGCAGGTCTTTCTCCAAA
GTTTAGCCATCGGTATTTTTAACATTCAACACGCCTTTGATCCTCAACTGATTTTAATCGGGGGTGGTGTTTCCCAAGCT
GACTTTCTACTGTCAGCGATTGAAGCTGAACTAGACAAACTCTACCAAGCCGTCGAAATCTCCGACCTTAGACCCCAATT
AGCCATTTGTCACTTTAAAAACGAAGCCAATCTTCTTGGAGCTGCCATTGATTTTTACCAAGAACACAAGGAGGCCTAA

Upstream 100 bases:

>100_bases
AGTATAGAATCACTTAGAAAGCCTTTTCATTGTTGTTTAAATCTGTCATACTAAGATGAGACATGATCGTCTATTCTACT
ATAATAAAGGAGAACACCTC

Downstream 100 bases:

>100_bases
CCATGGACCGCTAAATCCCTCTTATCCCCTATTGTCCCTAATCGCCTCTGACATCTACAAAGACATCCTAAAAGGATTGC
TGATTAGCTACAACGATACT

Product: putative sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSLEKFYQLLDQEVARYSAYHFSGIAISSPGAVNKEKGVIEGASAIPY
IHHFKIQEALEERLHYPISIENDANCAALAEATLGAGKGASSLAMLVIGTGVGGSLVIDGKIYHGAHLFGGEFGFMIMND
RYQTFSQLGTVVNMAKRYSAIVNNGKDYTGKAVLALTEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGGGVSQA
DFLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDFYQEHKEA

Sequences:

>Translated_292_residues
MSLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSLEKFYQLLDQEVARYSAYHFSGIAISSPGAVNKEKGVIEGASAIPY
IHHFKIQEALEERLHYPISIENDANCAALAEATLGAGKGASSLAMLVIGTGVGGSLVIDGKIYHGAHLFGGEFGFMIMND
RYQTFSQLGTVVNMAKRYSAIVNNGKDYTGKAVLALTEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGGGVSQA
DFLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDFYQEHKEA
>Mature_291_residues
SLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSLEKFYQLLDQEVARYSAYHFSGIAISSPGAVNKEKGVIEGASAIPYI
HHFKIQEALEERLHYPISIENDANCAALAEATLGAGKGASSLAMLVIGTGVGGSLVIDGKIYHGAHLFGGEFGFMIMNDR
YQTFSQLGTVVNMAKRYSAIVNNGKDYTGKAVLALTEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGGGVSQAD
FLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDFYQEHKEA

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI4885285, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI190014632, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI298566315, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI298566325, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1787363, Length=301, Percent_Identity=27.5747508305648, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081733, Length=265, Percent_Identity=26.0377358490566, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787878, Length=297, Percent_Identity=23.2323232323232, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 31514; Mature: 31383

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSLEKFYQLLDQEVARYSAYHFSGIAIS
CEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEC
SPGAVNKEKGVIEGASAIPYIHHFKIQEALEERLHYPISIENDANCAALAEATLGAGKGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCC
SSLAMLVIGTGVGGSLVIDGKIYHGAHLFGGEFGFMIMNDRYQTFSQLGTVVNMAKRYSA
CCEEEEEEECCCCCEEEECCEEEECEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
IVNNGKDYTGKAVLALTEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGGGVSQA
HHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHH
DFLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDFYQEHKEA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSLEKFYQLLDQEVARYSAYHFSGIAIS
EEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEC
SPGAVNKEKGVIEGASAIPYIHHFKIQEALEERLHYPISIENDANCAALAEATLGAGKGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCC
SSLAMLVIGTGVGGSLVIDGKIYHGAHLFGGEFGFMIMNDRYQTFSQLGTVVNMAKRYSA
CCEEEEEEECCCCCEEEECCEEEECEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
IVNNGKDYTGKAVLALTEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGGGVSQA
HHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCHH
DFLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDFYQEHKEA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]