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The map label for this gene is yabB [H]

Identifier: 21910612

GI number: 21910612

Start: 1119050

End: 1119904

Strand: Direct

Name: yabB [H]

Synonym: SpyM3_1076

Alternate gene names: 21910612

Gene position: 1119050-1119904 (Clockwise)

Preceding gene: 21910603

Following gene: 21910613

Centisome position: 58.88

GC content: 38.6

Gene sequence:

>855_bases
ATGAAAGTTGACTTTTCGAAAGTCAAAATCACTCTTCAAACATTCACCTCAAGCCTATTTTATGTTAAAATAACAGGTAT
GATAAAAGCAATCTTAAAAGAAGGCGAACGTATTGATCAACTCTTTTCAAGTGATGTTGGCATTATTCAAAACAAGGATG
TCTTTAGTTACTCTATTGATAGCGTCCTCTTATCCCGCTTCCCCAAGATGCCTTCCAAAGGGTTAATTGTGGATTTGTGC
TCAGGAAATGGGGCGGTTGGCTTATTTGCTAGCACTAGAACCAAGGCAGCCATCGTTGAAGTAGAATTACAAAAACGGCT
TGCTGATATGGGACAACGCTCTATCCAGCTCAATCAACTGGAAGACCAAGTAACCATGATTTGTGATGATTTAAAAAACC
TCCTAAACCATGTGCCACGTTCAGGAGTTGATTTGATGCTCTGCAATCCCCCTTACTTTAAAAGTCACGAAAGTTCTAAG
AAGAACGTCTCTGAACATTATTTACTGGCTCGTCATGAAGTGACCACTAATTTAGAAGAAATTTGTCAGGTAGCCCGTCA
TGCCCTTAAATCAAATGGTCGTCTGGCAATGGTTCATCGACCAGATCGATTCTTGGAAATTATAGATAGCCTTAGAGCTA
ATGGTCTTGCCCCTAAAAGGGTACAATTTGTCTATCCTAAATTAGGTAAATCAGCTAATATGTTACTTATTGAAGCAATC
AAAGACGGTTCTATTGAAGGGATGACTATTTTACCTCCTTTAGTTGTCCACAAGGAAAACGGAGAATACACTGATCATAT
TTTTGAGATTTATTTTGGTGCTGCTTCCAAAGGAAAACCTAATCATGACCACTAA

Upstream 100 bases:

>100_bases
CATTGCCATTGACAACCCATAATAAAAAGACTACTAAACCGCGTAAGTAAGCGTAAAACACAGGCTTCTCCTTTAATAGA
ATAATCTTACTTATTGTATC

Downstream 100 bases:

>100_bases
AAAAGCTTATATGTATGTGTTAGAATGTGTTGATAAAACCCTCTACACTGGTTATACAACTGATTTGAAAAAGCGTTTAG
CTACACATAACGCAGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKVDFSKVKITLQTFTSSLFYVKITGMIKAILKEGERIDQLFSSDVGIIQNKDVFSYSIDSVLLSRFPKMPSKGLIVDLC
SGNGAVGLFASTRTKAAIVEVELQKRLADMGQRSIQLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSK
KNVSEHYLLARHEVTTNLEEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRVQFVYPKLGKSANMLLIEAI
KDGSIEGMTILPPLVVHKENGEYTDHIFEIYFGAASKGKPNHDH

Sequences:

>Translated_284_residues
MKVDFSKVKITLQTFTSSLFYVKITGMIKAILKEGERIDQLFSSDVGIIQNKDVFSYSIDSVLLSRFPKMPSKGLIVDLC
SGNGAVGLFASTRTKAAIVEVELQKRLADMGQRSIQLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSK
KNVSEHYLLARHEVTTNLEEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRVQFVYPKLGKSANMLLIEAI
KDGSIEGMTILPPLVVHKENGEYTDHIFEIYFGAASKGKPNHDH
>Mature_284_residues
MKVDFSKVKITLQTFTSSLFYVKITGMIKAILKEGERIDQLFSSDVGIIQNKDVFSYSIDSVLLSRFPKMPSKGLIVDLC
SGNGAVGLFASTRTKAAIVEVELQKRLADMGQRSIQLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSK
KNVSEHYLLARHEVTTNLEEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRVQFVYPKLGKSANMLLIEAI
KDGSIEGMTILPPLVVHKENGEYTDHIFEIYFGAASKGKPNHDH

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 31798; Mature: 31798

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDFSKVKITLQTFTSSLFYVKITGMIKAILKEGERIDQLFSSDVGIIQNKDVFSYSID
CCCCHHHHEEEHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHH
SVLLSRFPKMPSKGLIVDLCSGNGAVGLFASTRTKAAIVEVELQKRLADMGQRSIQLNQL
HHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHCHHCEEHHHH
EDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVTTNLEE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRVQFVYPKLGKSANMLLIEAI
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEE
KDGSIEGMTILPPLVVHKENGEYTDHIFEIYFGAASKGKPNHDH
CCCCCCCEEECCCEEEECCCCCHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MKVDFSKVKITLQTFTSSLFYVKITGMIKAILKEGERIDQLFSSDVGIIQNKDVFSYSID
CCCCHHHHEEEHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCHHHHHH
SVLLSRFPKMPSKGLIVDLCSGNGAVGLFASTRTKAAIVEVELQKRLADMGQRSIQLNQL
HHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHCHHCEEHHHH
EDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVTTNLEE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
ICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRVQFVYPKLGKSANMLLIEAI
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEE
KDGSIEGMTILPPLVVHKENGEYTDHIFEIYFGAASKGKPNHDH
CCCCCCCEEECCCEEEECCCCCHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]