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The map label for this gene is nisX1 [H]

Identifier: 21910590

GI number: 21910590

Start: 1095934

End: 1096359

Strand: Direct

Name: nisX1 [H]

Synonym: SpyM3_1054

Alternate gene names: 21910590

Gene position: 1095934-1096359 (Clockwise)

Preceding gene: 21910589

Following gene: 21910602

Centisome position: 57.66

GC content: 36.85

Gene sequence:

>426_bases
GTGTCTGTCTTGATAGACGTTTATAGTAGAAAGATTGTTGGTTGGGCAATGGGCCGACGTATGCAAGACAAGTTGGTAAC
AGAAGCTTTCAATCAAGCTTATAATAGAGAAAAGCCTAAAGAAGGGGTAATCGTCCATACAGATCAGGGTTCTCAATATA
CCGGAGCACAATTTCAGGACCTACTTAGATGGAAAAAATGTAAGTCCAGTATGAGTCGAAAAGGTAATCCATACGATAAT
GCACTCATGGAATCCTTTTATAAAACATTAAAAAAAGAGCTTGTCAATGATGCTCATTTCGCAACTATTGAGCAAGCTAA
GCTTGAGATTTTTAAATATAGTGAGACTTGCTATAACCCTAAACGTCTGCATTCAGCTTTAGGATATCTCTCACCTGTAG
AATTTGAAAAAATAGTTACTCATTAG

Upstream 100 bases:

>100_bases
TCGTCCCAATCTTGTTAATCAATGTTTCCAAGCGACTGGTAAGAATAAATTATGGCTAGGAGACCTAACCTACATTCCTA
CACATGAAGGAATACTTTAT

Downstream 100 bases:

>100_bases
CTTAACTTTATGTCTATTTTTTCTTGACAAGTCCAATTAAATGTTAGTTTTTTTGTCCAACTTCTGGGGTGCAGTTCATC
CATCCGAAGCTTTTTATTAT

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGAQFQDLLRWKKCKSSMSRKGNPYDN
ALMESFYKTLKKELVNDAHFATIEQAKLEIFKYSETCYNPKRLHSALGYLSPVEFEKIVTH

Sequences:

>Translated_141_residues
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGAQFQDLLRWKKCKSSMSRKGNPYDN
ALMESFYKTLKKELVNDAHFATIEQAKLEIFKYSETCYNPKRLHSALGYLSPVEFEKIVTH
>Mature_140_residues
SVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGAQFQDLLRWKKCKSSMSRKGNPYDNA
LMESFYKTLKKELVNDAHFATIEQAKLEIFKYSETCYNPKRLHSALGYLSPVEFEKIVTH

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=95, Percent_Identity=37.8947368421053, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1788405, Length=136, Percent_Identity=43.3823529411765, Blast_Score=119, Evalue=6e-29,
Organism=Escherichia coli, GI1787263, Length=136, Percent_Identity=43.3823529411765, Blast_Score=119, Evalue=6e-29,
Organism=Escherichia coli, GI1786753, Length=136, Percent_Identity=43.3823529411765, Blast_Score=119, Evalue=6e-29,
Organism=Escherichia coli, GI1786570, Length=136, Percent_Identity=43.3823529411765, Blast_Score=119, Evalue=6e-29,
Organism=Escherichia coli, GI1786490, Length=136, Percent_Identity=43.3823529411765, Blast_Score=119, Evalue=6e-29,
Organism=Escherichia coli, GI1789981, Length=135, Percent_Identity=34.0740740740741, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 16391; Mature: 16260

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGAQFQD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHH
LLRWKKCKSSMSRKGNPYDNALMESFYKTLKKELVNDAHFATIEQAKLEIFKYSETCYNP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH
KRLHSALGYLSPVEFEKIVTH
HHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
SVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGAQFQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHH
LLRWKKCKSSMSRKGNPYDNALMESFYKTLKKELVNDAHFATIEQAKLEIFKYSETCYNP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCH
KRLHSALGYLSPVEFEKIVTH
HHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]