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The map label for this gene is ymfN [H]

Identifier: 21910482

GI number: 21910482

Start: 998901

End: 1000655

Strand: Reverse

Name: ymfN [H]

Synonym: SpyM3_0946

Alternate gene names: 21910482

Gene position: 1000655-998901 (Counterclockwise)

Preceding gene: 21910483

Following gene: 21910481

Centisome position: 52.65

GC content: 38.29

Gene sequence:

>1755_bases
ATGACAATAGAATACGATTATTCAGCAATTGGCGACATCTATAAAGATGACGCTTTTTATTATGCAAAAATGGTCGTTGA
CGAACAGATAAAATCAAGTAAAAAAGTTTTTAAGGCATGCTTGAGACATTTGAATGACCTCAAAAGAATAGATGATGAAG
ATTTTAAATTTGTCTATTTACCAGAAAAAGCAGCTGATCCAATTAACTTCATCGAGATTTTGCCAGATGTTAAAACGGGG
AAACCTTATCCGTTGGCGATGTTCCAAAAGTTCATTATCGGAAATTTATATGGATGGCGAAAGAAAACAGACCATTCATT
GAGACGTTTTAGAAAGGCTATGATTTCTGTTGCTCGTAAAAATGGTAAAACAATTCTGATAGCTGGTATCTTGCTTTATG
AATTTTTGTTTGGCCATAACCCTTCTATGAGTAGGCAACTATTTTGTACGGCTAATGACCGTACACAGGCTAAAATTGCT
TGGGATATGGCAAAAAAGCAGCTTTCATCCCTTAGAGCAAAGGACGTTGATGTCAGAAAGGCTACGAAAATTGTTCGTGA
TGAGCTTAAAAATTTACATGACGAATCTTACATCAGAGCGCTTAGTCGCGATACAGGCGCGGTTGATGGATTTGAGCCTT
ACGTTGGTGTCTTAGATGAGTTCGCAGCATCAAAGACTAATGAAATGCTAGAGCTTTTAGAATCTGGTCAAGGTCAGCTT
GATAACCCGTTTATCTTGATTATCTCAACGGCTGGTATGGATTTGAATGTCCCGATGCACACAATTGAGTACCCATACAT
TACCAAAATACTAGACGGAGAAATCACAGACGAGGGTTATTTTGGATATGTTGCAGAACAGGATAACGAAGAGGAAATCA
AAGATGAATCAAACTGGATAAAATCAAATCCAATCCTTGAGGTTGAAGCTTTACATGATAAGCTAATGGATTACCTGAGA
ACGCGCCGTAGAGTGTCCCTTGAAACTGGTGAAATCAATAAAGTATTAATCAAAAACTTTAACATGTGGCGTCAATCAAG
TGAAGAATCATATATTGACAAACAATCTTGGGAACTTGCTCAAATTGATAAGCCTGACACCTATAAACGCAGAGTTTGGT
TAGGTGTTGACGTTGGTCGCGTTAGTGACTTATTTGCGATAAGCTCTGTGATCATGATGGACGACTACTGGTATCTCGAC
AGCTTTTCTTTTGTTGCTACAAAATATGGGTTAACAGCCAAGGAGAAGCGGGATGGTGTATCTTATAGTAATTTGGAACG
TCAAGGCTATTGCGAAATCACAACTTTAGAATCAGGTGTCATTGATGATGAACGTGTACTCGAAAAAATCGAAGAGATGG
TCTATACCAACGAGTGGGAGGTTAATGGAATTTGCTTTGACCCCTACCAATTCGGAACTCTACTTACAATGATTGAAAAA
AGGCATCCAGAATGGCCTCTGATAGAAGTTTCGCAGACGACCATGGTTTTGAACATGCCCACAAAACAGTTCCGTGATGA
CCTCAAAAAAGGCAAAATAAAGCACTCTGGGAACCCATTACTGACAATGGCTGTTAACAATGCTTATATTAAAACGGATA
ACAATGGTATGAGGATTGATAAGAATAAAAATAGTAATAAAATTGACCCTCTTGATGCTGCTTTAGACGGGTATGCAGTT
TGTTACTTAGAGCCATTTGATGGGTCTGGTTACTGGACAAACGAAAAAATAATAGGAGGAGAATCGCTGTTTTGA

Upstream 100 bases:

>100_bases
GTTTGACTGTGGATAGCCGGATGAAAATGTTTATCCCTAAGGAAGAGGAAAAACCTAAGAGTATTTTTGATAAATTTGGA
GGTTAAAAAGAAAGGAGATC

Downstream 100 bases:

>100_bases
TTGGTTTTGTTTTAAAAAACATACATACATTAATCTTGTTAGTTGGACTAGGGTTATTGATGTATGGGTTGTTTTTGTTT
GGTGATAAAGTCGGTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MTIEYDYSAIGDIYKDDAFYYAKMVVDEQIKSSKKVFKACLRHLNDLKRIDDEDFKFVYLPEKAADPINFIEILPDVKTG
KPYPLAMFQKFIIGNLYGWRKKTDHSLRRFRKAMISVARKNGKTILIAGILLYEFLFGHNPSMSRQLFCTANDRTQAKIA
WDMAKKQLSSLRAKDVDVRKATKIVRDELKNLHDESYIRALSRDTGAVDGFEPYVGVLDEFAASKTNEMLELLESGQGQL
DNPFILIISTAGMDLNVPMHTIEYPYITKILDGEITDEGYFGYVAEQDNEEEIKDESNWIKSNPILEVEALHDKLMDYLR
TRRRVSLETGEINKVLIKNFNMWRQSSEESYIDKQSWELAQIDKPDTYKRRVWLGVDVGRVSDLFAISSVIMMDDYWYLD
SFSFVATKYGLTAKEKRDGVSYSNLERQGYCEITTLESGVIDDERVLEKIEEMVYTNEWEVNGICFDPYQFGTLLTMIEK
RHPEWPLIEVSQTTMVLNMPTKQFRDDLKKGKIKHSGNPLLTMAVNNAYIKTDNNGMRIDKNKNSNKIDPLDAALDGYAV
CYLEPFDGSGYWTNEKIIGGESLF

Sequences:

>Translated_584_residues
MTIEYDYSAIGDIYKDDAFYYAKMVVDEQIKSSKKVFKACLRHLNDLKRIDDEDFKFVYLPEKAADPINFIEILPDVKTG
KPYPLAMFQKFIIGNLYGWRKKTDHSLRRFRKAMISVARKNGKTILIAGILLYEFLFGHNPSMSRQLFCTANDRTQAKIA
WDMAKKQLSSLRAKDVDVRKATKIVRDELKNLHDESYIRALSRDTGAVDGFEPYVGVLDEFAASKTNEMLELLESGQGQL
DNPFILIISTAGMDLNVPMHTIEYPYITKILDGEITDEGYFGYVAEQDNEEEIKDESNWIKSNPILEVEALHDKLMDYLR
TRRRVSLETGEINKVLIKNFNMWRQSSEESYIDKQSWELAQIDKPDTYKRRVWLGVDVGRVSDLFAISSVIMMDDYWYLD
SFSFVATKYGLTAKEKRDGVSYSNLERQGYCEITTLESGVIDDERVLEKIEEMVYTNEWEVNGICFDPYQFGTLLTMIEK
RHPEWPLIEVSQTTMVLNMPTKQFRDDLKKGKIKHSGNPLLTMAVNNAYIKTDNNGMRIDKNKNSNKIDPLDAALDGYAV
CYLEPFDGSGYWTNEKIIGGESLF
>Mature_583_residues
TIEYDYSAIGDIYKDDAFYYAKMVVDEQIKSSKKVFKACLRHLNDLKRIDDEDFKFVYLPEKAADPINFIEILPDVKTGK
PYPLAMFQKFIIGNLYGWRKKTDHSLRRFRKAMISVARKNGKTILIAGILLYEFLFGHNPSMSRQLFCTANDRTQAKIAW
DMAKKQLSSLRAKDVDVRKATKIVRDELKNLHDESYIRALSRDTGAVDGFEPYVGVLDEFAASKTNEMLELLESGQGQLD
NPFILIISTAGMDLNVPMHTIEYPYITKILDGEITDEGYFGYVAEQDNEEEIKDESNWIKSNPILEVEALHDKLMDYLRT
RRRVSLETGEINKVLIKNFNMWRQSSEESYIDKQSWELAQIDKPDTYKRRVWLGVDVGRVSDLFAISSVIMMDDYWYLDS
FSFVATKYGLTAKEKRDGVSYSNLERQGYCEITTLESGVIDDERVLEKIEEMVYTNEWEVNGICFDPYQFGTLLTMIEKR
HPEWPLIEVSQTTMVLNMPTKQFRDDLKKGKIKHSGNPLLTMAVNNAYIKTDNNGMRIDKNKNSNKIDPLDAALDGYAVC
YLEPFDGSGYWTNEKIIGGESLF

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 67387; Mature: 67255

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEYDYSAIGDIYKDDAFYYAKMVVDEQIKSSKKVFKACLRHLNDLKRIDDEDFKFVYL
CEEEECHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PEKAADPINFIEILPDVKTGKPYPLAMFQKFIIGNLYGWRKKTDHSLRRFRKAMISVARK
CHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
NGKTILIAGILLYEFLFGHNPSMSRQLFCTANDRTQAKIAWDMAKKQLSSLRAKDVDVRK
CCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHH
ATKIVRDELKNLHDESYIRALSRDTGAVDGFEPYVGVLDEFAASKTNEMLELLESGQGQL
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNPFILIISTAGMDLNVPMHTIEYPYITKILDGEITDEGYFGYVAEQDNEEEIKDESNWI
CCCEEEEEEECCCEECCCCEEECCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCC
KSNPILEVEALHDKLMDYLRTRRRVSLETGEINKVLIKNFNMWRQSSEESYIDKQSWELA
CCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEE
QIDKPDTYKRRVWLGVDVGRVSDLFAISSVIMMDDYWYLDSFSFVATKYGLTAKEKRDGV
ECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCCCHHHHCCC
SYSNLERQGYCEITTLESGVIDDERVLEKIEEMVYTNEWEVNGICFDPYQFGTLLTMIEK
CHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHH
RHPEWPLIEVSQTTMVLNMPTKQFRDDLKKGKIKHSGNPLLTMAVNNAYIKTDNNGMRID
CCCCCCEEEEECEEEEEECCHHHHHHHHHHCCEEECCCCEEEEEECCEEEEECCCCEEEE
KNKNSNKIDPLDAALDGYAVCYLEPFDGSGYWTNEKIIGGESLF
CCCCCCCCCCHHHHCCCEEEEEEEECCCCCEECCCEECCCCCCC
>Mature Secondary Structure 
TIEYDYSAIGDIYKDDAFYYAKMVVDEQIKSSKKVFKACLRHLNDLKRIDDEDFKFVYL
EEEECHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PEKAADPINFIEILPDVKTGKPYPLAMFQKFIIGNLYGWRKKTDHSLRRFRKAMISVARK
CHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
NGKTILIAGILLYEFLFGHNPSMSRQLFCTANDRTQAKIAWDMAKKQLSSLRAKDVDVRK
CCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHH
ATKIVRDELKNLHDESYIRALSRDTGAVDGFEPYVGVLDEFAASKTNEMLELLESGQGQL
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNPFILIISTAGMDLNVPMHTIEYPYITKILDGEITDEGYFGYVAEQDNEEEIKDESNWI
CCCEEEEEEECCCEECCCCEEECCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCC
KSNPILEVEALHDKLMDYLRTRRRVSLETGEINKVLIKNFNMWRQSSEESYIDKQSWELA
CCCCCEEHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEE
QIDKPDTYKRRVWLGVDVGRVSDLFAISSVIMMDDYWYLDSFSFVATKYGLTAKEKRDGV
ECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCCCHHHHCCC
SYSNLERQGYCEITTLESGVIDDERVLEKIEEMVYTNEWEVNGICFDPYQFGTLLTMIEK
CHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHH
RHPEWPLIEVSQTTMVLNMPTKQFRDDLKKGKIKHSGNPLLTMAVNNAYIKTDNNGMRID
CCCCCCEEEEECEEEEEECCHHHHHHHHHHCCEEECCCCEEEEEECCEEEEECCCCEEEE
KNKNSNKIDPLDAALDGYAVCYLEPFDGSGYWTNEKIIGGESLF
CCCCCCCCCCHHHHCCCEEEEEEEECCCCCEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]