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The map label for this gene is yfmM [H]

Identifier: 21910383

GI number: 21910383

Start: 902484

End: 904028

Strand: Reverse

Name: yfmM [H]

Synonym: SpyM3_0847

Alternate gene names: 21910383

Gene position: 904028-902484 (Counterclockwise)

Preceding gene: 21910384

Following gene: 21910382

Centisome position: 47.57

GC content: 36.89

Gene sequence:

>1545_bases
ATGAGTATTTTAGAAGTTAAGCAGTTGAGTCACGGTTTTGGGGATCGGGCTATTTTTGAAAATGTGTCATTTCGCCTCTT
AAAAGGTGAACATATTGGACTAGTTGGAGCAAATGGTGAAGGAAAATCAACCTTTATGAGTATAGTCACAGGACATTTAC
AGCCTGATGAAGGAAAAGTAGAGTGGTCGAAGTATGTCACTGCAGGTTACCTGGATCAACATACAGTGTTGGAATCAGGA
CAAACCGTTCGTGATGTCTTGCGAACTGCTTTTGATGAGTTATTTAAGACCGAGAATCGTATTAATGAGATTTACGCGTC
AATGGCAGATGATAAAGCTGATATTGCTGTTTTGATGGAAGAAGTAGGTGAGCTTCAAGATCGTTTAGAAAGTCGTGATT
TCTATACTTTGGATGCTAAGATTGATGAAGTAGCGCGTGCGCTTGGTGTTATGGATTTTGGAATGGAGTCAGATGTTACA
TCCTTATCAGGTGGGCAACGAACAAAGGTTTTATTAGCCAAATTACTATTAGAAAAACCTGATATTCTGCTATTAGATGA
ACCAACTAACCATTTGGATGCTGAGCATATTGAATGGTTAAAACGCTATTTACAACATTATGAAAATGCTTTTGTGTTGA
TTTCGCATGATATTTCTTTCTTAAATGATGTGATTAATATTGTTTACCATGTTGAAAATCAAAGTTTAGTTCGCTATACT
GGGGATTATTACCAATTTCAAGCTGTTTATGAGATGAAACAATCTCAACTTGAAGCAGCCTATGAACGTCAACAAAAAGA
GATTGCTAACTTGCAGGATTTTGTCAACCGAAATAAGGCTCGGGTAGCGACACGTAACATGGCAATGTCTCGCCAAAAAA
AACTTGATAAGATGGATATAATTGAACTTCAAGCTGAGAAACCAAAACCAAATTTTGAATTTAAGCAAGCTAGAACTCCC
AGTCGATTCATTTTTCAAACAAAAAATCTTGTGATTGGTTATGATTACCCATTGACCAAAGAACCCTTAAATATAACGTT
TGAAAGAAACCAAAAAATTGCTATTGTTGGGGCCAACGGTATTGGAAAATCTACTTTGCTAAAAAGTTTATTAGGTGTTA
TCGAGCCTTTAGAAGGTCATATTGTCACAGGGGATTTTTTAGAAGTTGGCTACTTTGAACAAGAAGTGACAGGTGTTAAC
CGACAAACTCCGCTAGAAGTAGTTTGGGATGCTTTTCCTGCCTTAAATCAGGCAGAAGTTCGAGCGGCACTAGCTCGTTG
CGGACTAACATCAAAACATATCGAAAGTCAAATTCAAGTACTTTCGGGTGGCGAACAAGCAAAAGTTCGTTTTTGTTTGT
TGATGAATCGTGAAAATAACGTGCTTATTTTAGACGAACCAACAAATCATCTTGATATTGATGCTAAAAATGAGCTCAAA
CGTGCTTTAAAAGCATATAAGGGTTCTATTTTAATGGTTTGTCATGAACCTGATTTCTACAATGGGTGGGTAACCGATAC
TTGGGATTTTAGTAAGTTAACCTAA

Upstream 100 bases:

>100_bases
ACTTTTAGTCAAATATTGACAAAAGGTTACAATTTTGCCATAATGAAATAACTATAAAGCCGTTTTGACGGCTTTTTTGA
TGACAGTTAAGGAAGAAACG

Downstream 100 bases:

>100_bases
ACTATTCCTTAATTTTTTACACAGAAATTACTAAAATCAGTAAAGATATAGAATAAATACTGCTAGATATGTGATGGTTT
AGGTAACTGATCACCAACCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQHTVLESG
QTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVT
SLSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQSLVRYT
GDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFEFKQARTP
SRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVN
RQTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDIDAKNELK
RALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT

Sequences:

>Translated_514_residues
MSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQHTVLESG
QTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVT
SLSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQSLVRYT
GDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFEFKQARTP
SRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVN
RQTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDIDAKNELK
RALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
>Mature_513_residues
SILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQHTVLESGQ
TVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVTS
LSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQSLVRYTG
DYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFEFKQARTPS
RFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVNR
QTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDIDAKNELKR
ALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=29.0135396518375, Blast_Score=206, Evalue=6e-53,
Organism=Homo sapiens, GI69354671, Length=504, Percent_Identity=32.5396825396825, Blast_Score=192, Evalue=9e-49,
Organism=Homo sapiens, GI10947135, Length=504, Percent_Identity=32.5396825396825, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI10947137, Length=523, Percent_Identity=29.6367112810707, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI27881506, Length=523, Percent_Identity=29.6367112810707, Blast_Score=189, Evalue=7e-48,
Organism=Escherichia coli, GI1787041, Length=502, Percent_Identity=34.0637450199203, Blast_Score=265, Evalue=7e-72,
Organism=Escherichia coli, GI1789751, Length=487, Percent_Identity=28.3367556468172, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI2367384, Length=500, Percent_Identity=29.4, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=28.6527514231499, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI1788897, Length=500, Percent_Identity=23.2, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788506, Length=241, Percent_Identity=26.9709543568465, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786975, Length=237, Percent_Identity=25.3164556962025, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788165, Length=165, Percent_Identity=30.9090909090909, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=25.2293577981651, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787758, Length=149, Percent_Identity=25.503355704698, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=502, Percent_Identity=27.8884462151394, Blast_Score=207, Evalue=9e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=504, Percent_Identity=29.3650793650794, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=28.3783783783784, Blast_Score=197, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=517, Percent_Identity=30.5609284332689, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=507, Percent_Identity=29.1913214990138, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=28.5, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=398, Percent_Identity=27.1356783919598, Blast_Score=131, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=25.5754475703325, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24666836, Length=512, Percent_Identity=30.46875, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24642252, Length=524, Percent_Identity=28.8167938931298, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI18859989, Length=524, Percent_Identity=28.8167938931298, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24641342, Length=503, Percent_Identity=30.8151093439364, Blast_Score=198, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58508; Mature: 58377

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKV
CCCHHHHHHHCCCCCHHHHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
EWSKYVTAGYLDQHTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLME
EHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVTSLSGGQRTKVLLAKLLLEKP
HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHCCC
DILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQSLVRYT
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEC
GDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE
IELQAEKPKPNFEFKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANG
EEEECCCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCC
IGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVNRQTPLEVVWDAFPALNQAEV
CCHHHHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHCCCCCCCCHHHHHHHHCCCCHHHH
RAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDIDAKNELK
HHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHH
RALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKV
CCHHHHHHHCCCCCHHHHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
EWSKYVTAGYLDQHTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLME
EHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVTSLSGGQRTKVLLAKLLLEKP
HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHCCC
DILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQSLVRYT
CEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEC
GDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE
IELQAEKPKPNFEFKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANG
EEEECCCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCC
IGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVNRQTPLEVVWDAFPALNQAEV
CCHHHHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHCCCCCCCCHHHHHHHHCCCCHHHH
RAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDIDAKNELK
HHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHH
RALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]