Definition Streptococcus pyogenes MGAS315 chromosome, complete genome.
Accession NC_004070
Length 1,900,521

Click here to switch to the map view.

The map label for this gene is apbE [H]

Identifier: 21910332

GI number: 21910332

Start: 848667

End: 849605

Strand: Reverse

Name: apbE [H]

Synonym: SpyM3_0796

Alternate gene names: 21910332

Gene position: 849605-848667 (Counterclockwise)

Preceding gene: 21910333

Following gene: 21910326

Centisome position: 44.7

GC content: 37.17

Gene sequence:

>939_bases
ATGTTTGTTACGCAACAATTAAAGCTAATGGGAACAGTTATTGATATTCAGATCGAATCTGACAAAGCTTGCCAACAACT
AAGTAGAGTCATTGACTTATTATATACTTACAAAAATCGTTTTTCAGCTAATGATTCAAACTCTGAATTGATGGCTATTA
ATCAGGCGGCTGGTGTTAAACCCGTCAGCGTCCACTCTGATTTATTTAACCTAATCCAAATTGGTAAAGCTCATAGCTTG
TCAACACCAAGTAATCTTAATATCGCCATTGGGCCACTTGTTCAAGCCTGGCGAATTGGATTTGAAGATGCTAGAGTGCC
TAGTCATAACCTTATCTCACAACAGTTAGCTCTAACAGATCCTAGACAGGTTCTTATAGATGACAAAAAACAGACTGTCT
TTTTACAACAAGTAGGAATGGCTTTAGACTTAGGAGCCTTAGCAAAAGGTTATATTACTGATAAGATTATGGCCTACCTG
ATTGAAGATGGTATTGACTCTGCCCTTATTAATTTAGGTGGAAATGTACGCGTTCATGGACCTAATCCGAAAAGCCCTGA
CAAGACTTTTCGAATTGGTATTCAAAAACCAGATGCTAAACGTGGGCAACATCTTGGTGTCATCAAGGTTAACAATCACT
CTGTTGTGACTTCTGGAATTTATGAAAGGCAGTTTACATCCAAAGGGAAACAGTATCATCATATCTTAGATCGTCAGACA
GGCTACCCTATAGAAACAGATATGCTTAGCTTAACGATCATGGCTCCTTCTTCTTTTTATTGTGACATATGGGCTACCCG
TTTATTTGGTCTTGATAGCTCAATGATTATTACACTTTTAAACACCTTTGATAATATTGAAGGTCTTCTAGTAACAAGAA
AGCACCATGTCCTTATGTCAAATGGTTTGAGACACTATTTTCAACCATACTATCATTAA

Upstream 100 bases:

>100_bases
CCTGAAGGAACTTACTATCCTCAAGGTGAAATGAAACAAAAATCATAATGACCTTCCCCCACTCCTTAGTGGGGGTATTC
TGCTAAAAAGAGGACTAATT

Downstream 100 bases:

>100_bases
AAGGGGTTAACGGTTTGCTCAAAACTGATCACAGAAAAAACGGCTCAATTAGCCGTTTTTTAATTATTCATCTTGTTTGT
CTTTGCCATTTAAAACTAAA

Product: putative thiamine biosynthesis lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL
STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL
IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT
GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH

Sequences:

>Translated_312_residues
MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL
STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL
IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT
GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH
>Mature_312_residues
MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL
STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL
IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT
GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH

Specific function: Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2- methyl pyrimidine (HMP) moiety of thiamine [H]

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ApbE family [H]

Homologues:

Organism=Escherichia coli, GI1788543, Length=255, Percent_Identity=29.0196078431373, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003374 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 34905; Mature: 34905

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVK
CCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
PVSVHSDLFNLIQIGKAHSLSTPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTD
EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYLIEDGIDSALINLGGNVRVHG
CHHEEECCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEC
PNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT
CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHCCC
GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMS
CCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHH
NGLRHYFQPYYH
CCHHHHCCCCCC
>Mature Secondary Structure
MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVK
CCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
PVSVHSDLFNLIQIGKAHSLSTPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTD
EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYLIEDGIDSALINLGGNVRVHG
CHHEEECCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEC
PNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT
CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHCCC
GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMS
CCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHH
NGLRHYFQPYYH
CCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]