Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is apbE [H]
Identifier: 21910332
GI number: 21910332
Start: 848667
End: 849605
Strand: Reverse
Name: apbE [H]
Synonym: SpyM3_0796
Alternate gene names: 21910332
Gene position: 849605-848667 (Counterclockwise)
Preceding gene: 21910333
Following gene: 21910326
Centisome position: 44.7
GC content: 37.17
Gene sequence:
>939_bases ATGTTTGTTACGCAACAATTAAAGCTAATGGGAACAGTTATTGATATTCAGATCGAATCTGACAAAGCTTGCCAACAACT AAGTAGAGTCATTGACTTATTATATACTTACAAAAATCGTTTTTCAGCTAATGATTCAAACTCTGAATTGATGGCTATTA ATCAGGCGGCTGGTGTTAAACCCGTCAGCGTCCACTCTGATTTATTTAACCTAATCCAAATTGGTAAAGCTCATAGCTTG TCAACACCAAGTAATCTTAATATCGCCATTGGGCCACTTGTTCAAGCCTGGCGAATTGGATTTGAAGATGCTAGAGTGCC TAGTCATAACCTTATCTCACAACAGTTAGCTCTAACAGATCCTAGACAGGTTCTTATAGATGACAAAAAACAGACTGTCT TTTTACAACAAGTAGGAATGGCTTTAGACTTAGGAGCCTTAGCAAAAGGTTATATTACTGATAAGATTATGGCCTACCTG ATTGAAGATGGTATTGACTCTGCCCTTATTAATTTAGGTGGAAATGTACGCGTTCATGGACCTAATCCGAAAAGCCCTGA CAAGACTTTTCGAATTGGTATTCAAAAACCAGATGCTAAACGTGGGCAACATCTTGGTGTCATCAAGGTTAACAATCACT CTGTTGTGACTTCTGGAATTTATGAAAGGCAGTTTACATCCAAAGGGAAACAGTATCATCATATCTTAGATCGTCAGACA GGCTACCCTATAGAAACAGATATGCTTAGCTTAACGATCATGGCTCCTTCTTCTTTTTATTGTGACATATGGGCTACCCG TTTATTTGGTCTTGATAGCTCAATGATTATTACACTTTTAAACACCTTTGATAATATTGAAGGTCTTCTAGTAACAAGAA AGCACCATGTCCTTATGTCAAATGGTTTGAGACACTATTTTCAACCATACTATCATTAA
Upstream 100 bases:
>100_bases CCTGAAGGAACTTACTATCCTCAAGGTGAAATGAAACAAAAATCATAATGACCTTCCCCCACTCCTTAGTGGGGGTATTC TGCTAAAAAGAGGACTAATT
Downstream 100 bases:
>100_bases AAGGGGTTAACGGTTTGCTCAAAACTGATCACAGAAAAAACGGCTCAATTAGCCGTTTTTTAATTATTCATCTTGTTTGT CTTTGCCATTTAAAACTAAA
Product: putative thiamine biosynthesis lipoprotein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH
Sequences:
>Translated_312_residues MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH >Mature_312_residues MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVKPVSVHSDLFNLIQIGKAHSL STPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTDPRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYL IEDGIDSALINLGGNVRVHGPNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMSNGLRHYFQPYYH
Specific function: Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2- methyl pyrimidine (HMP) moiety of thiamine [H]
COG id: COG1477
COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ApbE family [H]
Homologues:
Organism=Escherichia coli, GI1788543, Length=255, Percent_Identity=29.0196078431373, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003374 [H]
Pfam domain/function: PF02424 ApbE [H]
EC number: NA
Molecular weight: Translated: 34905; Mature: 34905
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVK CCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC PVSVHSDLFNLIQIGKAHSLSTPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTD EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC PRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYLIEDGIDSALINLGGNVRVHG CHHEEECCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEC PNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHCCC GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMS CCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHH NGLRHYFQPYYH CCHHHHCCCCCC >Mature Secondary Structure MFVTQQLKLMGTVIDIQIESDKACQQLSRVIDLLYTYKNRFSANDSNSELMAINQAAGVK CCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC PVSVHSDLFNLIQIGKAHSLSTPSNLNIAIGPLVQAWRIGFEDARVPSHNLISQQLALTD EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC PRQVLIDDKKQTVFLQQVGMALDLGALAKGYITDKIMAYLIEDGIDSALINLGGNVRVHG CHHEEECCCHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEC PNPKSPDKTFRIGIQKPDAKRGQHLGVIKVNNHSVVTSGIYERQFTSKGKQYHHILDRQT CCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHCCC GYPIETDMLSLTIMAPSSFYCDIWATRLFGLDSSMIITLLNTFDNIEGLLVTRKHHVLMS CCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECHHHHHH NGLRHYFQPYYH CCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]