Click here to switch to the map view.

The map label for this gene is ydfG [H]

Identifier: 21910324

GI number: 21910324

Start: 840861

End: 841175

Strand: Direct

Name: ydfG [H]

Synonym: SpyM3_0788

Alternate gene names: 21910324

Gene position: 840861-841175 (Clockwise)

Preceding gene: 161485746

Following gene: 21910325

Centisome position: 44.24

GC content: 42.54

Gene sequence:

>315_bases
ATGGGAAATATTGCCTTAGTAACAGGGGCTTCAGCCGGTTTTGGCAGAGCCATTGTCGAACACTTAATTGCAGATGGGAT
AAAGGTTATTGGTGCTTCTCGTCGTCTTGAGAAACTCAAGGCCTTAGAAACGAGCTTTGGGTCGGACAACTTTTACCCTT
TGCAGATGGATGTCACAGATACCAAAGCGATTGATGATGCTTTGACAAGTCTACCAAATCAGTGGCAAGATATTACTATT
TTAGTGAATAATGCAGGCTTGGCATTGGGACTTGACTTGATAAGGCTTATGAAGCCGATTTTGAGAATTGGATGA

Upstream 100 bases:

>100_bases
AACCGCTAAGTGATGTGTTAGAAGTTGTCCTAAGACTAATTGACATTATTAAAAACGAGTTGGCCAGACCATCTCGTTTT
TTTTGAAGGTGAGGAAATGT

Downstream 100 bases:

>100_bases
CGATGATTAACACTAATATTGTTGGGTTGATTTATCTCACACGTCAATTATTACCACATATGGTCTCCAAAGATGATGGT
ATTATTATTAATTTAGGGTC

Product: putative oxidoreductase, short chain dehydrogenase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGNIALVTGASAGFGRAIVEHLIADGIKVIGASRRLEKLKALETSFGSDNFYPLQMDVTDTKAIDDALTSLPNQWQDITI
LVNNAGLALGLDLIRLMKPILRIG

Sequences:

>Translated_104_residues
MGNIALVTGASAGFGRAIVEHLIADGIKVIGASRRLEKLKALETSFGSDNFYPLQMDVTDTKAIDDALTSLPNQWQDITI
LVNNAGLALGLDLIRLMKPILRIG
>Mature_103_residues
GNIALVTGASAGFGRAIVEHLIADGIKVIGASRRLEKLKALETSFGSDNFYPLQMDVTDTKAIDDALTSLPNQWQDITIL
VNNAGLALGLDLIRLMKPILRIG

Specific function: Catalyzes the NADP-dependent oxidation of L-allo- threonine and L-serine [H]

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI1787820, Length=89, Percent_Identity=52.8089887640449, Blast_Score=91, Evalue=1e-20,
Organism=Escherichia coli, GI1787335, Length=95, Percent_Identity=42.1052631578947, Blast_Score=64, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=96, Percent_Identity=43.75, Blast_Score=69, Evalue=9e-14,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 11148; Mature: 11017

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIALVTGASAGFGRAIVEHLIADGIKVIGASRRLEKLKALETSFGSDNFYPLQMDVTD
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH
TKAIDDALTSLPNQWQDITILVNNAGLALGLDLIRLMKPILRIG
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNIALVTGASAGFGRAIVEHLIADGIKVIGASRRLEKLKALETSFGSDNFYPLQMDVTD
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCH
TKAIDDALTSLPNQWQDITILVNNAGLALGLDLIRLMKPILRIG
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]