Click here to switch to the map view.

The map label for this gene is dnaC [H]

Identifier: 21910226

GI number: 21910226

Start: 755537

End: 756877

Strand: Direct

Name: dnaC [H]

Synonym: SpyM3_0690

Alternate gene names: 21910226

Gene position: 755537-756877 (Clockwise)

Preceding gene: 21910225

Following gene: 21910227

Centisome position: 39.75

GC content: 40.04

Gene sequence:

>1341_bases
ATGGAAGATTTTAAAATGTTGCCTCATGATCCTGTGTCAGAGCAGGCGGTCTTAGGGTCTATCTTTATCAATCCTGAAAA
AATCATTGAGGTGGCTGAGTATCTGAAACCAGATGATTTCTATAAACCAGCACACAGAATATTATTTAAGGCCATGCTAA
GTATTTCTGGCAATGCTGAGCCTATTGATGTCGTCACAGTTAAATCAGTGCTAGAAAGTCAAGACAATCTTGCTACTATT
GGCGGAATAACCTATCTACTGGAGGTAGTCAATGCAGTACCAACAAGCGCACACGCTGAACATTATGCAAAGATTGTGGC
TAAAAAAGCACAACTTAGATCTATCATTGACAATCTTTCTGATTCTATTGGCAATGCCTATGACGAGAACATGGACATTG
ACGAGATTATCGCAAAAACTGAGCGGTCGTTAATTGAGGTTAGTCAATCTAGTAATAAGAGTAGTTTTAGACCTATCCAT
GACGTACTAGCAGAAAACTATCAAAAAATTGAAGAGCGATCAAACAATAATACTCAGATTACAGGTATTGCCACAGGCTT
CTATGACTTTGATAAGTTAACAACAGGATTACATGAAGATCAATTAATTATCTTAGCAGCCAGACCTGCCATGGGTAAGA
CGGCATTTGCTCTTAATATCGCTCAAAATGTGGCAACTAAGTCTAACAAAGCTGTAGCGGTTTTCTCGCTTGAGATGGGT
GCAGAAAGTTTAGTTGAGCGTATGCTTGCTAACGAGGGAACTATTGAGAGTCATCACATCAGGACTGGTCAGTTAACTGT
TGAGGAATGGCAAAGGCTCATCTATGTGCAAGGAGAGCTTGCTGAAGCACCTATTTTCATAGATGACACGGCTGGCGTCA
AAATTACTGATATTAGAGCAAGAGCCAGAAGGCTGTCACAAGAGACTGATGGGCTTGGATTGATAGTCATTGACTATCTT
CAACTCATTCAAGGGTCACGTTCTGACAACCGGCAACAAGAGGTGTCAGAGATTTCAAGACAGCTTAAAATTCTCGCCAA
AGAATTAAAAGTGCCTGTCATTGCTCTTAGTCAACTGTCACGTAGCGTTGAGCAAAGGCAGGACAAGAGACCTATCATGT
CAGATTTAAGGGAGTCAGGAAGCATTGAGCAAGATGCTGATATTGTCGCCTTTTTATATCGTGATGATTACTATACTGAC
AAATCTGACGATCAGCCAGAAAGTAATCTGACTGAGTTGATTATCAAGAAAAATAGGCATGGCAGTCTTGGCACTGTTAA
CCTGTATTTTCATAAAGAGTACACAAAATTTTCTAGTGTACGGGAGGAAAAAAATGATTAA

Upstream 100 bases:

>100_bases
AACGAAGAACAACCGAAGTCAGTAACAAAATCCAGAGATGATATTGTCGCTGAGCGGTACGGAAGAGTAATGCAGATTGA
ACATCATGAGGGAAGCAGCT

Downstream 100 bases:

>100_bases
AAAGAGTGAAGTCACAGGATTTCTGGCCTTCTTTAAATTTCCAAAGCCATTCATCTATGATGGAAAATATAAAACGTTGA
GCAACAATGCCAAGCTGATG

Product: putative DNA polymerase III delta prime subunit - phage associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAEPIDVVTVKSVLESQDNLATI
GGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLSDSIGNAYDENMDIDEIIAKTERSLIEVSQSSNKSSFRPIH
DVLAENYQKIEERSNNNTQITGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVFSLEMG
AESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKITDIRARARRLSQETDGLGLIVIDYL
QLIQGSRSDNRQQEVSEISRQLKILAKELKVPVIALSQLSRSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTD
KSDDQPESNLTELIIKKNRHGSLGTVNLYFHKEYTKFSSVREEKND

Sequences:

>Translated_446_residues
MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAEPIDVVTVKSVLESQDNLATI
GGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLSDSIGNAYDENMDIDEIIAKTERSLIEVSQSSNKSSFRPIH
DVLAENYQKIEERSNNNTQITGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVFSLEMG
AESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKITDIRARARRLSQETDGLGLIVIDYL
QLIQGSRSDNRQQEVSEISRQLKILAKELKVPVIALSQLSRSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTD
KSDDQPESNLTELIIKKNRHGSLGTVNLYFHKEYTKFSSVREEKND
>Mature_446_residues
MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAEPIDVVTVKSVLESQDNLATI
GGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLSDSIGNAYDENMDIDEIIAKTERSLIEVSQSSNKSSFRPIH
DVLAENYQKIEERSNNNTQITGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVFSLEMG
AESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKITDIRARARRLSQETDGLGLIVIDYL
QLIQGSRSDNRQQEVSEISRQLKILAKELKVPVIALSQLSRSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTD
KSDDQPESNLTELIIKKNRHGSLGTVNLYFHKEYTKFSSVREEKND

Specific function: Participates In Initiation And Elongation During Chromosome Replication; It Exhibits DNA-Dependent ATPase Activity And Contains Distinct Active Sites For ATP Binding, DNA Binding, And Interaction With DNAc Protein, Primase, And Other Prepriming Proteins.

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=440, Percent_Identity=42.7272727272727, Blast_Score=345, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 50029; Mature: 50029

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAE
CCCCCCCCCCCCCCHHHHHHEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PIDVVTVKSVLESQDNLATIGGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLS
CCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DSIGNAYDENMDIDEIIAKTERSLIEVSQSSNKSSFRPIHDVLAENYQKIEERSNNNTQI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
TGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVFSLEMG
EEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC
AESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKITDIRA
HHHHHHHHHCCCCCCCCCEEEECCEEHHHHHCEEEEECCCCCCCEEEECCCCEEEEHHHH
RARRLSQETDGLGLIVIDYLQLIQGSRSDNRQQEVSEISRQLKILAKELKVPVIALSQLS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTDKSDDQPESNLTELIIKKNRH
HHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
GSLGTVNLYFHKEYTKFSSVREEKND
CCCEEEEEEEECHHHHHHHHHHCCCC
>Mature Secondary Structure
MEDFKMLPHDPVSEQAVLGSIFINPEKIIEVAEYLKPDDFYKPAHRILFKAMLSISGNAE
CCCCCCCCCCCCCCHHHHHHEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PIDVVTVKSVLESQDNLATIGGITYLLEVVNAVPTSAHAEHYAKIVAKKAQLRSIIDNLS
CCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DSIGNAYDENMDIDEIIAKTERSLIEVSQSSNKSSFRPIHDVLAENYQKIEERSNNNTQI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
TGIATGFYDFDKLTTGLHEDQLIILAARPAMGKTAFALNIAQNVATKSNKAVAVFSLEMG
EEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC
AESLVERMLANEGTIESHHIRTGQLTVEEWQRLIYVQGELAEAPIFIDDTAGVKITDIRA
HHHHHHHHHCCCCCCCCCEEEECCEEHHHHHCEEEEECCCCCCCEEEECCCCEEEEHHHH
RARRLSQETDGLGLIVIDYLQLIQGSRSDNRQQEVSEISRQLKILAKELKVPVIALSQLS
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RSVEQRQDKRPIMSDLRESGSIEQDADIVAFLYRDDYYTDKSDDQPESNLTELIIKKNRH
HHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
GSLGTVNLYFHKEYTKFSSVREEKND
CCCEEEEEEEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 1312531 [H]