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The map label for this gene is ybbR [H]

Identifier: 21910206

GI number: 21910206

Start: 736272

End: 737228

Strand: Direct

Name: ybbR [H]

Synonym: SpyM3_0670

Alternate gene names: 21910206

Gene position: 736272-737228 (Clockwise)

Preceding gene: 21910205

Following gene: 21910207

Centisome position: 38.74

GC content: 36.26

Gene sequence:

>957_bases
ATGAAACGATTTTTAAATAGTCGTCCTTGGTTAGGAATGGTATCAGTCTTTTTTGCGATTCTCCTTTTTTTAACTGCAGC
ATCGAGCAATCATAATAACTCTAGCTCGCAAATTTATAGTCCGATTGAAACCTATACGCATAGCCTTAAAGATGTACCAA
TTGATATGAAGTATGATAGTGACAAATATTTTATCAGTGGGTATTCTTATGGTGCGGAAGTTTATCTAACCTCCACTAAT
CGTATCAAATTAGATTCTGAAGTGAACAATGATACACGTAATTTTAAGATTGTGGCGGATCTAACACATAGTCATCCAGG
TACAGTAAATGTCAACCTAAGAGTAGAAAATCTTCCTTCTGGGGTGACAGCTACCGTATCTCCAGATAAAATATCAGTCA
CAATTGGCAAAAAAGAATCTAAGGTATTTCCTGTTAGAGGAAGCGTTGATGCTAAACAAATTGCAAATGGTTATGAAATT
AGCAAAATTGAAACGGGGGTTGATAAGGTTGAAGTGACCAGTGATGAATCTACCATTGCTTTAATTGATCACGTTGTGGC
AAAGTTACCTGATGATCAAGTGTTAGATAGGAATTATAGTAGTCGAGTGACCTTACAAGCTGTCTCAGCTGATGGAACTA
TTTTAGCAAGTGCAATTGATCCTGCAAAAACAAATTTATCAGTTGCTGTAAAAAAAATAACGAAATCAGTCCCGATTAGA
GTTGAGGCAGTGGGGATGATGGATGATAGCTTATCAGATATTCAATACAAATTGTCAAAACAAACAGCTGTTATCTCAGG
TAGTCGAGAGGTCTTAGAAGATATTGATGAAATTATTGCAGAAGTTAACATTTCTGATGTCACTAAAAATACTAGTAAGA
CCGTGAGTTTGTCTTCTAGTCAGGTGTCAATTGAGCCGTCAGTAGTGACCGTTCAGTTGACAACCACCAAAAAATAA

Upstream 100 bases:

>100_bases
TAAGCACAGATGAATTTGAAACGGTACTTAGGACCTACCTGATGAGTGATTCAAATGTTAGTTTACCATGGTATAAGAAA
ATTCTAGGAGGGAAATCTAA

Downstream 100 bases:

>100_bases
TGGATAATAACTAGGAAAATTGAATGGAGGAAGCCATTAGGCTTATATAAATTATGGGAAAATATTTTGGAACAGATGGT
GTTCGTGGCGAAGCAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDSDKYFISGYSYGAEVYLTSTN
RIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPSGVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEI
SKIETGVDKVEVTSDESTIALIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIR
VEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSSQVSIEPSVVTVQLTTTKK

Sequences:

>Translated_318_residues
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDSDKYFISGYSYGAEVYLTSTN
RIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPSGVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEI
SKIETGVDKVEVTSDESTIALIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIR
VEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSSQVSIEPSVVTVQLTTTKK
>Mature_318_residues
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDSDKYFISGYSYGAEVYLTSTN
RIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPSGVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEI
SKIETGVDKVEVTSDESTIALIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIR
VEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSSQVSIEPSVVTVQLTTTKK

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 34657; Mature: 34657

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEECHHHHHHHHHHCCCEEEEECC
DKYFISGYSYGAEVYLTSTNRIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPS
CEEEEEEECCCEEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCC
GVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEISKIETGVDKVEVTSDESTIA
CCEEEECCCEEEEEECCCCCEEEEECCCCCHHHHCCCCEEEEECCCCCEEEEECCCCHHH
LIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIR
HHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCEE
VEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSS
EEEEECCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCC
QVSIEPSVVTVQLTTTKK
EEEECCCEEEEEEEECCC
>Mature Secondary Structure
MKRFLNSRPWLGMVSVFFAILLFLTAASSNHNNSSSQIYSPIETYTHSLKDVPIDMKYDS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEECHHHHHHHHHHCCCEEEEECC
DKYFISGYSYGAEVYLTSTNRIKLDSEVNNDTRNFKIVADLTHSHPGTVNVNLRVENLPS
CEEEEEEECCCEEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCC
GVTATVSPDKISVTIGKKESKVFPVRGSVDAKQIANGYEISKIETGVDKVEVTSDESTIA
CCEEEECCCEEEEEECCCCCEEEEECCCCCHHHHCCCCEEEEECCCCCEEEEECCCCHHH
LIDHVVAKLPDDQVLDRNYSSRVTLQAVSADGTILASAIDPAKTNLSVAVKKITKSVPIR
HHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCEE
VEAVGMMDDSLSDIQYKLSKQTAVISGSREVLEDIDEIIAEVNISDVTKNTSKTVSLSSS
EEEEECCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCC
QVSIEPSVVTVQLTTTKK
EEEECCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]