Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is fliI
Identifier: 30410813
GI number: 30410813
Start: 80868
End: 82235
Strand: Direct
Name: fliI
Synonym: BUsg070
Alternate gene names: 30410813
Gene position: 80868-82235 (Clockwise)
Preceding gene: 21672361
Following gene: 21672363
Centisome position: 12.61
GC content: 30.34
Gene sequence:
>1368_bases ATGTTAATGAAATTAAGATTTTCTGAATTATTAAATAATATTTCTTCTTTCGAAAAGAAAGTTAATAATCTTTCTGATAT TTTTTCTTATGGTTGTCTTATTAGTGTTAATGGTTTACTTTTAGAAGTGATTGGGTTGACGGCACCAATTGGATCTCGAT GTTATGTTGAAAGAATAATAGATGGTAAAATTTTAAATATCAGTGCTGAAGTAGTCGGTTTTAAAAAAGAAAAAACATTG TTATTTTCTCTTGAAGAAACATATGGTGTTTTCCCTGGTACCCGAGTGTTTTTAAAATGTTTTAAAAATACATATTCTAT TACAGGAAAAATTCCATTATCAACAGAGCTATTGGGTAGAGTACTCGATAGTAAAGGTAGACCTTTAGACGGACGTTCTC AATTAAATCCCAAATTTTTTACCTTTTTAAAAAGTAATGTTGTTAATCCATTAAATAGAAAACCAATTACTGAAGTGTTA GATACTGGAATACGTGCTATAAATGCTCTTATAACTGTAGGAAGAGGTCAAAGAATAGGAATTTTTTCCAGTTCAGGTCT TGGAAAAAGTATTCTATTAGGTATGATGGCAAAATATACAAAAGCAGATGTAGTTATTATTGGTTTAATTGGAGAACGAG GGCGGGAAGTAAAAGATTTTATAGAAAATATACTGGGTTCAAATGGATTGTCTCGATCTGTAGTAATTGCTGCTCCTGCT GATGTTTCTCCTTTATTGCAAATAGAAGCTGCATCGTATGCTACAAGCATAGCTGAATATTTTCGTAAAAAAAATAAACA TGTATTATTGATTATGGATTCCTTAACTCGTTATGCTATGGCACAAAGAGCTGTTTCATTATCGTTAGGAGAACTACCTG TCTCTAAGGGGTATCCATCTTCTGTTTTTTCGAAAATTCCTATTTTAGTAGAACGCACAGGAAATACAGATAATTATGGT TCTATTACCTCGTTTTATACAGTATTAACTGAAAGTGAAGAAGATCCGCAGGATCCAATTGCTCACATTTGTCGTTCTAT ATTAGACGGGCATATTGTATTATCTCGGCATTATGCTGAATTAGGGCATTATCCAGCAATTGATATTGAAAATTCTATTA GTCGCGTAATGCCTAATATTATTAGCAAAAAACAATATTCTCAAGCTTGTTATTTTAAAAAATTAATTGCTTCTTATCAA AGAAATAGAGATTTAATTAATATTGGTGCTTATTTAAAAGGAACTGATTCAACTTTAGATCATGCTATTAAGATATGGCC TATCTTAGAAAGATTTTTACAGCAGAAGCAATCAGAAAAAAGTAGTTATTTATCTTCTTGCGAAGAATTAAATCAAATAT TTATTTAA
Upstream 100 bases:
>100_bases ATATAGATATTAACGGTTGTAAAATTCGATCAGAAAATGGTGATATAGATAATACTATTGAGGCTAGATGGAAGGAACTA TGTCGTCTTGTTTCAGAGGA
Downstream 100 bases:
>100_bases TTTTTTATTTTAGAACTTGATGGGATATTAGTTAATGAAATATAAAAAAAAAATATTCTCTATTTTAGAAAATTTAGAAA AAAAAAATATAGAAAAAGAT
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERIIDGKILNISAEVVGFKKEKTL LFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVL DTGIRAINALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPSSVFSKIPILVERTGNTDNYG SITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQ RNRDLINIGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI
Sequences:
>Translated_455_residues MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERIIDGKILNISAEVVGFKKEKTL LFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVL DTGIRAINALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPSSVFSKIPILVERTGNTDNYG SITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQ RNRDLINIGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI >Mature_455_residues MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERIIDGKILNISAEVVGFKKEKTL LFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVL DTGIRAINALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPSSVFSKIPILVERTGNTDNYG SITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQ RNRDLINIGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. May be involved in a specialized protein export pathway that proceeds without signal peptide cleavage
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family
Homologues:
Organism=Homo sapiens, GI32189394, Length=311, Percent_Identity=31.5112540192926, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI50345984, Length=335, Percent_Identity=28.0597014925373, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4757810, Length=335, Percent_Identity=28.0597014925373, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI19913428, Length=410, Percent_Identity=25.609756097561, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI19913426, Length=410, Percent_Identity=25.3658536585366, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI19913424, Length=247, Percent_Identity=29.1497975708502, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1788251, Length=441, Percent_Identity=56.4625850340136, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI1790170, Length=304, Percent_Identity=29.2763157894737, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1790172, Length=348, Percent_Identity=25.8620689655172, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1790217, Length=240, Percent_Identity=24.5833333333333, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI25144756, Length=313, Percent_Identity=30.6709265175719, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17510931, Length=397, Percent_Identity=24.6851385390428, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17570191, Length=409, Percent_Identity=26.161369193154, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71988080, Length=335, Percent_Identity=26.5671641791045, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71988063, Length=335, Percent_Identity=26.5671641791045, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71988074, Length=320, Percent_Identity=25.625, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565854, Length=311, Percent_Identity=28.6173633440514, Blast_Score=95, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322581, Length=339, Percent_Identity=29.4985250737463, Blast_Score=133, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6319603, Length=422, Percent_Identity=25.5924170616114, Blast_Score=126, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6319370, Length=340, Percent_Identity=27.9411764705882, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320016, Length=198, Percent_Identity=29.2929292929293, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI28574560, Length=313, Percent_Identity=31.9488817891374, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24638766, Length=362, Percent_Identity=30.1104972375691, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24658560, Length=337, Percent_Identity=29.673590504451, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI281361666, Length=408, Percent_Identity=26.7156862745098, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24646341, Length=408, Percent_Identity=26.7156862745098, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136796, Length=408, Percent_Identity=26.7156862745098, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI20129479, Length=242, Percent_Identity=28.5123966942149, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24583992, Length=245, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24583988, Length=245, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI24583986, Length=245, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI24583984, Length=245, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=9e-20,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLII_BUCAP (Q8KA42)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660429.2 - ProteinModelPortal: Q8KA42 - SMR: Q8KA42 - EnsemblBacteria: EBBUCT00000000128 - GeneID: 1005886 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg070 - GeneTree: EBGT00050000007862 - HOGENOM: HBG565875 - OMA: INDDSYH - ProtClustDB: CLSK315179 - BioCyc: BAPH198804:BUSG070-MONOMER - GO: GO:0005737 - InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - SMART: SM00382 - TIGRFAMs: TIGR01026
Pfam domain/function: PF00006 ATP-synt_ab
EC number: =3.6.3.14
Molecular weight: Translated: 50588; Mature: 50588
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERII CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCHHHHHHHH DGKILNISAEVVGFKKEKTLLFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGR CCEEEEEEHHHEECCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHH VLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVLDTGIRAINALITVGRGQRIG HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE IFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCC DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPS CCCCHHEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SVFSKIPILVERTGNTDNYGSITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAE HHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHH LGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLINIGAYLKGTDSTLD HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCHHHH HAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERII CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCHHHHHHHH DGKILNISAEVVGFKKEKTLLFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGR CCEEEEEEHHHEECCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHH VLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVLDTGIRAINALITVGRGQRIG HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE IFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCC DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPS CCCCHHEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCH SVFSKIPILVERTGNTDNYGSITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAE HHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHH LGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLINIGAYLKGTDSTLD HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCHHHH HAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438