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The map label for this gene is flgH

Identifier: 21672607

GI number: 21672607

Start: 376389

End: 377105

Strand: Direct

Name: flgH

Synonym: BUsg331

Alternate gene names: 21672607

Gene position: 376389-377105 (Clockwise)

Preceding gene: 21672606

Following gene: 21672608

Centisome position: 58.68

GC content: 28.59

Gene sequence:

>717_bases
GTGGTAAAATTATTCAGTTATAAAATTAAATATTATTTAACTGCTTTTTTTATAATAATTATCCAAAGTTGCGCTTCTGT
TGAACATAAACCTTTAGTTGACGGTATTACAACTGCTATAGCACCTAATATAATACCTAAAATTAAAAATGGTTCTTTAT
TTCAAGAAAAAACACCTATAAATTATGGATATCAACCACTTTTTGAAGATCATAGATCTCATAATATAGGTGATACGATA
ACTGTAGTATTGCAGGAAAATATCAGTGCTAGTAATAGTTCTTCTTCAAATTTGACTCGCGATGGAAAGGCAAACGTAGG
AGTGACAGTAACGCCAGGAACATTAAATCCTATATTAGGGCTTAATGTTAATGATAACAAAACAGGAATAGATAGTATAG
GAAAAAATGACTTTTCAGGAAAAGGTAGTAATTCTGCTAAAAATACATTTACTGGTCTTATTACTGTTACTGTAAAGAAT
GTTCTTCCAAATGGAAATTTAAAAGTGATTGGTGAAAAACAAGTTGCTATTAATCAAGGTACGGAATTCATTCGTTTTTC
AGGTGTAATTAATCCTAACAATATCAATAAAAATAATTTAGTTGCTTCCACTCAAATTGCTGATACACGCATTGAATATG
TAAGTAATAATCGTATTAATGATATTCAAAAAATGGGTTGGTTACAGCGATTTTTATTAAAAATTTCACCTATTTAA

Upstream 100 bases:

>100_bases
TACAAAAATTATCTCAACTATAAACATTAATTTTGATTATTAATAAAATAAATGTAAACAATATATATTTTAAAATGTTT
TAATTAAGGACTGTTTTTCC

Downstream 100 bases:

>100_bases
TCATAAAAAATACTGAAAAAATAAATTTTTTTAAATAAAACTCATAAGGGATTATTTAAATCCTTTATGAGTAAAGACTA
ACATATTTAAAAAAATAAAA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVKLFSYKIKYYLTAFFIIIIQSCASVEHKPLVDGITTAIAPNIIPKIKNGSLFQEKTPINYGYQPLFEDHRSHNIGDTI
TVVLQENISASNSSSSNLTRDGKANVGVTVTPGTLNPILGLNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLITVTVKN
VLPNGNLKVIGEKQVAINQGTEFIRFSGVINPNNINKNNLVASTQIADTRIEYVSNNRINDIQKMGWLQRFLLKISPI

Sequences:

>Translated_238_residues
MVKLFSYKIKYYLTAFFIIIIQSCASVEHKPLVDGITTAIAPNIIPKIKNGSLFQEKTPINYGYQPLFEDHRSHNIGDTI
TVVLQENISASNSSSSNLTRDGKANVGVTVTPGTLNPILGLNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLITVTVKN
VLPNGNLKVIGEKQVAINQGTEFIRFSGVINPNNINKNNLVASTQIADTRIEYVSNNRINDIQKMGWLQRFLLKISPI
>Mature_238_residues
MVKLFSYKIKYYLTAFFIIIIQSCASVEHKPLVDGITTAIAPNIIPKIKNGSLFQEKTPINYGYQPLFEDHRSHNIGDTI
TVVLQENISASNSSSSNLTRDGKANVGVTVTPGTLNPILGLNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLITVTVKN
VLPNGNLKVIGEKQVAINQGTEFIRFSGVINPNNINKNNLVASTQIADTRIEYVSNNRINDIQKMGWLQRFLLKISPI

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=229, Percent_Identity=54.585152838428, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_BUCAP (Q8K9K3)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660674.1
- EnsemblBacteria:   EBBUCT00000000391
- GeneID:   1005557
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg331
- GeneTree:   EBGT00050000007975
- HOGENOM:   HBG507455
- OMA:   IAGEKQI
- ProtClustDB:   PRK00249
- BioCyc:   BAPH198804:BUSG331-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 26038; Mature: 26038

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLFSYKIKYYLTAFFIIIIQSCASVEHKPLVDGITTAIAPNIIPKIKNGSLFQEKTPI
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCC
NYGYQPLFEDHRSHNIGDTITVVLQENISASNSSSSNLTRDGKANVGVTVTPGTLNPILG
CCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE
LNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLITVTVKNVLPNGNLKVIGEKQVAINQG
ECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCEEEECCC
TEFIRFSGVINPNNINKNNLVASTQIADTRIEYVSNNRINDIQKMGWLQRFLLKISPI
CCEEEEECEECCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLFSYKIKYYLTAFFIIIIQSCASVEHKPLVDGITTAIAPNIIPKIKNGSLFQEKTPI
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCC
NYGYQPLFEDHRSHNIGDTITVVLQENISASNSSSSNLTRDGKANVGVTVTPGTLNPILG
CCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE
LNVNDNKTGIDSIGKNDFSGKGSNSAKNTFTGLITVTVKNVLPNGNLKVIGEKQVAINQG
ECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEECCEEEECCC
TEFIRFSGVINPNNINKNNLVASTQIADTRIEYVSNNRINDIQKMGWLQRFLLKISPI
CCEEEEECEECCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438