| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is gpmA
Identifier: 21672571
GI number: 21672571
Start: 338021
End: 338713
Strand: Direct
Name: gpmA
Synonym: BUsg294
Alternate gene names: 21672571
Gene position: 338021-338713 (Clockwise)
Preceding gene: 21672570
Following gene: 21672572
Centisome position: 52.7
GC content: 26.12
Gene sequence:
>693_bases ATGAAAACTAATAAATTAGTCTTAATTAGACATGGTCAAAGTAAATGGAATAAATTAAATAAATTTACTGGATGGCATGA TATAGAATTAAGTGACAATGGTATAAATGAAGCTCTAAAAGCCGGTTCTCTCTTGAAAAAAGAAAAATTTTTTTTCGATT ATGCACATACTTCTATGTTAAAAAGAGCAATACATACTTTAAGATATATTTTAGATACATTAGATCAATCTTGGTTACCA GTTCAAAAATCTTGGCGTTTAAATGAAAGACATTATGGTGCATTGGAGGGATTAAATAAAGATGAAATGATTTCAAAATA CGGTGAAGAACAAGTAAATTTATGGAGACGAAGTTTTGAAATTATACCACCTCAAATCAGATTAAATGATAAAAGATTTC CAGGAAATGATATACGTTATTCGAATATAGATAACAATGAACTTCCGTTAGGTGAAAGTTTAGAATTGACTGCAAAAAGA GTGATTCCTTATTGGAATAAATTTATTTTACCACAAATAAAAAAAAGAAATAGAGTTCTTATTGTAGCACATGGAAATTC TCTACGTGCATTAATTCAATTTTTAAATAAAATAGATAATAAAAAAATTTTAGAATTAAACATTCCAACTGCAACGCCAA TTATCCTAGAATTCAATGAAGAATATAATTCTATTAAATGGTATTATTTATAA
Upstream 100 bases:
>100_bases TTGTACTTTTATATTCATAAAAATTAATTTTTTATTTAGTCAAAAACTAATTTTTAATCAAATAATGATACACTTATATA TCAAAAATAGAAGATGAAAA
Downstream 100 bases:
>100_bases TCAATTATTTAAAATAAAATATTTTTCTGTCAAAAATTACTATGTATAAAAAAAATTTTTTAATATTTTTAATAATTTTA AAAAAAATTACATACAAAAA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKTNKLVLIRHGQSKWNKLNKFTGWHDIELSDNGINEALKAGSLLKKEKFFFDYAHTSMLKRAIHTLRYILDTLDQSWLP VQKSWRLNERHYGALEGLNKDEMISKYGEEQVNLWRRSFEIIPPQIRLNDKRFPGNDIRYSNIDNNELPLGESLELTAKR VIPYWNKFILPQIKKRNRVLIVAHGNSLRALIQFLNKIDNKKILELNIPTATPIILEFNEEYNSIKWYYL
Sequences:
>Translated_230_residues MKTNKLVLIRHGQSKWNKLNKFTGWHDIELSDNGINEALKAGSLLKKEKFFFDYAHTSMLKRAIHTLRYILDTLDQSWLP VQKSWRLNERHYGALEGLNKDEMISKYGEEQVNLWRRSFEIIPPQIRLNDKRFPGNDIRYSNIDNNELPLGESLELTAKR VIPYWNKFILPQIKKRNRVLIVAHGNSLRALIQFLNKIDNKKILELNIPTATPIILEFNEEYNSIKWYYL >Mature_230_residues MKTNKLVLIRHGQSKWNKLNKFTGWHDIELSDNGINEALKAGSLLKKEKFFFDYAHTSMLKRAIHTLRYILDTLDQSWLP VQKSWRLNERHYGALEGLNKDEMISKYGEEQVNLWRRSFEIIPPQIRLNDKRFPGNDIRYSNIDNNELPLGESLELTAKR VIPYWNKFILPQIKKRNRVLIVAHGNSLRALIQFLNKIDNKKILELNIPTATPIILEFNEEYNSIKWYYL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=231, Percent_Identity=50.2164502164502, Blast_Score=244, Evalue=6e-65, Organism=Homo sapiens, GI4505753, Length=228, Percent_Identity=47.8070175438597, Blast_Score=223, Evalue=1e-58, Organism=Homo sapiens, GI71274132, Length=228, Percent_Identity=45.6140350877193, Blast_Score=210, Evalue=8e-55, Organism=Homo sapiens, GI4502445, Length=229, Percent_Identity=44.9781659388646, Blast_Score=207, Evalue=8e-54, Organism=Homo sapiens, GI40353764, Length=229, Percent_Identity=44.9781659388646, Blast_Score=207, Evalue=8e-54, Organism=Homo sapiens, GI310129614, Length=165, Percent_Identity=47.8787878787879, Blast_Score=158, Evalue=4e-39, Organism=Escherichia coli, GI1786970, Length=230, Percent_Identity=59.1304347826087, Blast_Score=304, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6322697, Length=227, Percent_Identity=47.5770925110132, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6324516, Length=280, Percent_Identity=30, Blast_Score=125, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6320183, Length=279, Percent_Identity=27.9569892473118, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646216, Length=219, Percent_Identity=48.4018264840183, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI85725270, Length=224, Percent_Identity=46.4285714285714, Blast_Score=211, Evalue=4e-55, Organism=Drosophila melanogaster, GI85725272, Length=224, Percent_Identity=46.4285714285714, Blast_Score=211, Evalue=4e-55, Organism=Drosophila melanogaster, GI24650981, Length=224, Percent_Identity=46.4285714285714, Blast_Score=211, Evalue=4e-55, Organism=Drosophila melanogaster, GI28571817, Length=222, Percent_Identity=40.0900900900901, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571815, Length=222, Percent_Identity=40.0900900900901, Blast_Score=178, Evalue=2e-45, Organism=Drosophila melanogaster, GI24648979, Length=222, Percent_Identity=40.0900900900901, Blast_Score=178, Evalue=2e-45,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_BUCAP (Q8K9N1)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660638.1 - ProteinModelPortal: Q8K9N1 - SMR: Q8K9N1 - EnsemblBacteria: EBBUCT00000000355 - GeneID: 1005498 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg294 - GeneTree: EBGT00050000008044 - HOGENOM: HBG658938 - OMA: TGWKDPD - ProtClustDB: PRK14115 - BioCyc: BAPH198804:BUSG294-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 27265; Mature: 27265
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 11-11 ACT_SITE 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNKLVLIRHGQSKWNKLNKFTGWHDIELSDNGINEALKAGSLLKKEKFFFDYAHTSML CCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRAIHTLRYILDTLDQSWLPVQKSWRLNERHYGALEGLNKDEMISKYGEEQVNLWRRSFE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHHH IIPPQIRLNDKRFPGNDIRYSNIDNNELPLGESLELTAKRVIPYWNKFILPQIKKRNRVL CCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCEE IVAHGNSLRALIQFLNKIDNKKILELNIPTATPIILEFNEEYNSIKWYYL EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEC >Mature Secondary Structure MKTNKLVLIRHGQSKWNKLNKFTGWHDIELSDNGINEALKAGSLLKKEKFFFDYAHTSML CCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRAIHTLRYILDTLDQSWLPVQKSWRLNERHYGALEGLNKDEMISKYGEEQVNLWRRSFE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHHH IIPPQIRLNDKRFPGNDIRYSNIDNNELPLGESLELTAKRVIPYWNKFILPQIKKRNRVL CCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCEE IVAHGNSLRALIQFLNKIDNKKILELNIPTATPIILEFNEEYNSIKWYYL EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438