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The map label for this gene is dcd

Identifier: 21672393

GI number: 21672393

Start: 113675

End: 114256

Strand: Direct

Name: dcd

Synonym: BUsg101

Alternate gene names: 21672393

Gene position: 113675-114256 (Clockwise)

Preceding gene: 21672392

Following gene: 21672394

Centisome position: 17.72

GC content: 29.04

Gene sequence:

>582_bases
ATGCGTTTATCTGATACAGATATTGAAGAATGGTTAAGTAAAAAAAAATTGGTTATCCAGCCTTATCCTAAAAAACAATT
AATTAATGGAATTACCGTTGATATACATCTTGGTAATAAATTTCGTTTTTTTTATGATCACACCACTTCTTGTATTGATT
TAAGCGGTTCAAAAGAAAAAATAGCTTTAGATTTAAATAAAATTGTAAGTTGTGAAACTATTTTTTCTAAAAAGGAACCA
TTTTTTTTAAAACCAGGAGCTTTAGCATTGTTTTCAACTTTAGAAAATATTACCTTACCAAATAATTTAGTTGGTTGGTT
AGATGGACGTTCCTCGTTAGCTCGTCTTGGTCTTATGGTTCATGTTACATCACATCGAATTGATCCTGGTTGGCATGGTA
ATATTGTTTTAGAATTTTTTAATGCAGGAAAATTAACTTTGGTTTTAACTCCTGGAATAAAAATTGCAGCACTGAGTTTT
GAATTACTTTCAAAACCAGTTTTACGACCTTATAATTCTCGTAATGAATCTAAATATAAAAGACAAAACGGAGTTGTACC
TAGTCGAATTTATGAAGAATAA

Upstream 100 bases:

>100_bases
ATAATAAAATACATCTCTCTGCTATTAATAAAAATTATTTCTAATTTTTTATAAGATATTTTATGTTTACAACATATATA
AATTAATTTTAGGAAAAAAA

Downstream 100 bases:

>100_bases
ATACCTTTATATATAGTAATTTTTAAAAATGAAAAAGTTTACGATGAATCATATTTTGTATATGATATTACCTATTTAAT
TAAGTAAAAAATTATGTCTA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRLSDTDIEEWLSKKKLVIQPYPKKQLINGITVDIHLGNKFRFFYDHTTSCIDLSGSKEKIALDLNKIVSCETIFSKKEP
FFLKPGALALFSTLENITLPNNLVGWLDGRSSLARLGLMVHVTSHRIDPGWHGNIVLEFFNAGKLTLVLTPGIKIAALSF
ELLSKPVLRPYNSRNESKYKRQNGVVPSRIYEE

Sequences:

>Translated_193_residues
MRLSDTDIEEWLSKKKLVIQPYPKKQLINGITVDIHLGNKFRFFYDHTTSCIDLSGSKEKIALDLNKIVSCETIFSKKEP
FFLKPGALALFSTLENITLPNNLVGWLDGRSSLARLGLMVHVTSHRIDPGWHGNIVLEFFNAGKLTLVLTPGIKIAALSF
ELLSKPVLRPYNSRNESKYKRQNGVVPSRIYEE
>Mature_193_residues
MRLSDTDIEEWLSKKKLVIQPYPKKQLINGITVDIHLGNKFRFFYDHTTSCIDLSGSKEKIALDLNKIVSCETIFSKKEP
FFLKPGALALFSTLENITLPNNLVGWLDGRSSLARLGLMVHVTSHRIDPGWHGNIVLEFFNAGKLTLVLTPGIKIAALSF
ELLSKPVLRPYNSRNESKYKRQNGVVPSRIYEE

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=60.5263157894737, Blast_Score=244, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_BUCAP (Q9ZHD8)

Other databases:

- EMBL:   AF067228
- EMBL:   AE013218
- RefSeq:   NP_660460.1
- ProteinModelPortal:   Q9ZHD8
- SMR:   Q9ZHD8
- EnsemblBacteria:   EBBUCT00000000320
- GeneID:   1005918
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg101
- GeneTree:   EBGT00050000008146
- HOGENOM:   HBG553199
- OMA:   FSGHVTL
- ProtClustDB:   PRK00416
- BioCyc:   BAPH198804:BUSG101-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21872; Mature: 21872

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSDTDIEEWLSKKKLVIQPYPKKQLINGITVDIHLGNKFRFFYDHTTSCIDLSGSKEK
CCCCCCCHHHHHCCCCEEECCCCHHHHHCCEEEEEEECCEEEEEEECCCEEEECCCCCCE
IALDLNKIVSCETIFSKKEPFFLKPGALALFSTLENITLPNNLVGWLDGRSSLARLGLMV
EEEEHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHEEEE
HVTSHRIDPGWHGNIVLEFFNAGKLTLVLTPGIKIAALSFELLSKPVLRPYNSRNESKYK
EEECCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCHHHH
RQNGVVPSRIYEE
HHCCCCCHHHCCC
>Mature Secondary Structure
MRLSDTDIEEWLSKKKLVIQPYPKKQLINGITVDIHLGNKFRFFYDHTTSCIDLSGSKEK
CCCCCCCHHHHHCCCCEEECCCCHHHHHCCEEEEEEECCEEEEEEECCCEEEECCCCCCE
IALDLNKIVSCETIFSKKEPFFLKPGALALFSTLENITLPNNLVGWLDGRSSLARLGLMV
EEEEHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHEEEE
HVTSHRIDPGWHGNIVLEFFNAGKLTLVLTPGIKIAALSFELLSKPVLRPYNSRNESKYK
EEECCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCHHHH
RQNGVVPSRIYEE
HHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9767718; 12089438