Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is argC
Identifier: 21672338
GI number: 21672338
Start: 52469
End: 53473
Strand: Direct
Name: argC
Synonym: BUsg045
Alternate gene names: 21672338
Gene position: 52469-53473 (Clockwise)
Preceding gene: 21672336
Following gene: 21672339
Centisome position: 8.18
GC content: 27.06
Gene sequence:
>1005_bases ATGTTGAATGTGTTAATTGTTGGTGCTAGTGGATATTCTGGTGCGGAATTAGTTAATTATATTAACCGTCATATGTTTTC TAAAATTAAAAAAATTTTTGTTTCAGAAAATAGTTCTCATATAGGTAAATTATTTTCAGAATTACATCAAGAATTTAAAA ATATTATAGATTTACCATTTGAAGCAATCAACTATGATACTTTAATTGAAAAAGATATTGATGCTGTTTTTTTAGCTACT GATCATCACGTTAGTTACTCTCTTGTGCCCTTTTTTTTATCTCTTAATTGTGTTGTTTTTGATTTATCTGGTGCTTATAG AGTTAAAAACACTGATACTTATTTAAAGTATTATGGTTTTTCTCATCAACATCAAGATATCTTAAAACGATCTGTATATG GATTGGCTGAATGGAATAAGCAAGAAATTAAAAAAGCTGAATTAATTGCTGTTCCAGGATGTTACGCAACGTGTATACAA TTGGCATTAAAACCTCTTATAAAAGAAAATTTTTTAAATGATGAATTTATTCCAATTATTAATGCTATAAGTGGTGTTAG CGGAGCTGGTAGAAAAGCTAATATTACTAATAGTTTTTGTGAAGTTAGTTTGCATCCATATAATGTTTTTACTCATCGTC ATACTCCTGAAATTATAGAGCATTTAGGTATCCCAGTGATTTTTATTCCTCATTTAGGTTCCTTTTCACGTGGAATTCTT GCTAGTATTACATGTAAGTTAAAATGTAATTTTACATTCCAGGATATTTATAATTTATATAATACAGTTTATAAAGAAAA ACCATTAATTCGAGTATATGAAAAAAATTTTCCTAGTATTAAAGCTGTGGTAAAATTACCTTTTTGTGATATTGGATTTA TCATCCAAGATAAATATATCGTTATTATAGCTGCTGAAGATAATTTATTGAAAGGTGCAGCTGCACAAGCTATACAATGT TTTAATATTCGTTTTGGATTTTCTGAAATTGAATCAATTATTTAA
Upstream 100 bases:
>100_bases AAAATAAAAAATATCAATAAAATTTAATAATTAATAGAATTTATTTTAATTAACTGATTCTTTTTTTTAATATTTTTATT TTTTTAAGGTTTATTAATTT
Downstream 100 bases:
>100_bases ATGAGGTATTTTTTGATGATGAGTCCTTTGGTTATTAAATTAGGTGGAGTTCTTTTAGAAAGTGATAATGCAATGATGCG TTTGTTTAAAGCGCTTCTTG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLNVLIVGASGYSGAELVNYINRHMFSKIKKIFVSENSSHIGKLFSELHQEFKNIIDLPFEAINYDTLIEKDIDAVFLAT DHHVSYSLVPFFLSLNCVVFDLSGAYRVKNTDTYLKYYGFSHQHQDILKRSVYGLAEWNKQEIKKAELIAVPGCYATCIQ LALKPLIKENFLNDEFIPIINAISGVSGAGRKANITNSFCEVSLHPYNVFTHRHTPEIIEHLGIPVIFIPHLGSFSRGIL ASITCKLKCNFTFQDIYNLYNTVYKEKPLIRVYEKNFPSIKAVVKLPFCDIGFIIQDKYIVIIAAEDNLLKGAAAQAIQC FNIRFGFSEIESII
Sequences:
>Translated_334_residues MLNVLIVGASGYSGAELVNYINRHMFSKIKKIFVSENSSHIGKLFSELHQEFKNIIDLPFEAINYDTLIEKDIDAVFLAT DHHVSYSLVPFFLSLNCVVFDLSGAYRVKNTDTYLKYYGFSHQHQDILKRSVYGLAEWNKQEIKKAELIAVPGCYATCIQ LALKPLIKENFLNDEFIPIINAISGVSGAGRKANITNSFCEVSLHPYNVFTHRHTPEIIEHLGIPVIFIPHLGSFSRGIL ASITCKLKCNFTFQDIYNLYNTVYKEKPLIRVYEKNFPSIKAVVKLPFCDIGFIIQDKYIVIIAAEDNLLKGAAAQAIQC FNIRFGFSEIESII >Mature_334_residues MLNVLIVGASGYSGAELVNYINRHMFSKIKKIFVSENSSHIGKLFSELHQEFKNIIDLPFEAINYDTLIEKDIDAVFLAT DHHVSYSLVPFFLSLNCVVFDLSGAYRVKNTDTYLKYYGFSHQHQDILKRSVYGLAEWNKQEIKKAELIAVPGCYATCIQ LALKPLIKENFLNDEFIPIINAISGVSGAGRKANITNSFCEVSLHPYNVFTHRHTPEIIEHLGIPVIFIPHLGSFSRGIL ASITCKLKCNFTFQDIYNLYNTVYKEKPLIRVYEKNFPSIKAVVKLPFCDIGFIIQDKYIVIIAAEDNLLKGAAAQAIQC FNIRFGFSEIESII
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=334, Percent_Identity=57.7844311377245, Blast_Score=410, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6320913, Length=350, Percent_Identity=29.4285714285714, Blast_Score=110, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_BUCAP (Q8KA61)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660405.1 - ProteinModelPortal: Q8KA61 - SMR: Q8KA61 - EnsemblBacteria: EBBUCT00000000220 - GeneID: 1005861 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg045 - GeneTree: EBGT00050000007856 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: BAPH198804:BUSG045-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 37835; Mature: 37835
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 154-154
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVLIVGASGYSGAELVNYINRHMFSKIKKIFVSENSSHIGKLFSELHQEFKNIIDLPF CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH EAINYDTLIEKDIDAVFLATDHHVSYSLVPFFLSLNCVVFDLSGAYRVKNTDTYLKYYGF HHCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCEEECCCCCEEEECCC SHQHQDILKRSVYGLAEWNKQEIKKAELIAVPGCYATCIQLALKPLIKENFLNDEFIPII CCHHHHHHHHHHHHHHCCCHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH NAISGVSGAGRKANITNSFCEVSLHPYNVFTHRHTPEIIEHLGIPVIFIPHLGSFSRGIL HHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCE ASITCKLKCNFTFQDIYNLYNTVYKEKPLIRVYEKNFPSIKAVVKLPFCDIGFIIQDKYI EEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCEE VIIAAEDNLLKGAAAQAIQCFNIRFGFSEIESII EEEECCCCHHHHHHHHHEEEEEEEECHHHHHHCC >Mature Secondary Structure MLNVLIVGASGYSGAELVNYINRHMFSKIKKIFVSENSSHIGKLFSELHQEFKNIIDLPF CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH EAINYDTLIEKDIDAVFLATDHHVSYSLVPFFLSLNCVVFDLSGAYRVKNTDTYLKYYGF HHCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCEEECCCCCEEEECCC SHQHQDILKRSVYGLAEWNKQEIKKAELIAVPGCYATCIQLALKPLIKENFLNDEFIPII CCHHHHHHHHHHHHHHCCCHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH NAISGVSGAGRKANITNSFCEVSLHPYNVFTHRHTPEIIEHLGIPVIFIPHLGSFSRGIL HHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCE ASITCKLKCNFTFQDIYNLYNTVYKEKPLIRVYEKNFPSIKAVVKLPFCDIGFIIQDKYI EEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCEE VIIAAEDNLLKGAAAQAIQCFNIRFGFSEIESII EEEECCCCHHHHHHHHHEEEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438