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The map label for this gene is efp

Identifier: 21672315

GI number: 21672315

Start: 21429

End: 21992

Strand: Direct

Name: efp

Synonym: BUsg021

Alternate gene names: 21672315

Gene position: 21429-21992 (Clockwise)

Preceding gene: 21672313

Following gene: 21672318

Centisome position: 3.34

GC content: 25.71

Gene sequence:

>564_bases
ATGAGAGTATATCATAGTAATAACTTTCGTTCAGGTCGTAAAATTATTTTTGAAAAAGAACCTTGTTTAATAGAGTCTAG
TGAATTTGTTAAACCTGGAAAAGGTCAATCTTTTGTTCGTGTAAAATTAAGAAAATTGTTAACAAAGCAATTAATAGAAA
AAACATTTAAATCTACAGATTCTTTAGAAATAGCTGATGTTTCAGAATATACATTATCTTATTTATATAACGATGGTCAT
TTTTGGTATTTTATTAATAATAATTTTGAAGAATTATCAGTAGATAAAAAAATTGTTGGTGTCAATAAAAAGTGGTTATC
AGAACAAGATACATGTGTTATTACTTTTTGGAATAATCAAGCAATTTCTATTACACCTAACATTTTTGTGGAACTTAAAG
TGATAGATACAGAGATAGCATTAAAGAGTGATACAATAAACACTACTACTAAATTAGCAACATTAAGTACAGGTGCAATC
CTAAAAGTTCCTTTATTTATACAAATTGGATCATTAATTAAAGTAGACACTAGATCTGGTGAATATGTGTCTAGAATTAA
ATAA

Upstream 100 bases:

>100_bases
AACAATAGAATTTGAAATTTCATATAACCATGAATCTTTTTCTCTATTTAATTTTTTTGTGTTGTAATGTTTCATAAATT
TATTAAAAGTAGAGGTTTTT

Downstream 100 bases:

>100_bases
AAAAATTATTTATTTCTGATTATTAATATTCATCCCCCCTTACGTATTGTCTATAGCTATCCCATTCAAAAGTTAACCAT
AGACTATTACCTAAACGCAT

Product: elongation factor P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRVYHSNNFRSGRKIIFEKEPCLIESSEFVKPGKGQSFVRVKLRKLLTKQLIEKTFKSTDSLEIADVSEYTLSYLYNDGH
FWYFINNNFEELSVDKKIVGVNKKWLSEQDTCVITFWNNQAISITPNIFVELKVIDTEIALKSDTINTTTKLATLSTGAI
LKVPLFIQIGSLIKVDTRSGEYVSRIK

Sequences:

>Translated_187_residues
MRVYHSNNFRSGRKIIFEKEPCLIESSEFVKPGKGQSFVRVKLRKLLTKQLIEKTFKSTDSLEIADVSEYTLSYLYNDGH
FWYFINNNFEELSVDKKIVGVNKKWLSEQDTCVITFWNNQAISITPNIFVELKVIDTEIALKSDTINTTTKLATLSTGAI
LKVPLFIQIGSLIKVDTRSGEYVSRIK
>Mature_187_residues
MRVYHSNNFRSGRKIIFEKEPCLIESSEFVKPGKGQSFVRVKLRKLLTKQLIEKTFKSTDSLEIADVSEYTLSYLYNDGH
FWYFINNNFEELSVDKKIVGVNKKWLSEQDTCVITFWNNQAISITPNIFVELKVIDTEIALKSDTINTTTKLATLSTGAI
LKVPLFIQIGSLIKVDTRSGEYVSRIK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=188, Percent_Identity=62.7659574468085, Blast_Score=257, Evalue=4e-70,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_BUCAP (Q8KA80)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660382.1
- ProteinModelPortal:   Q8KA80
- SMR:   Q8KA80
- EnsemblBacteria:   EBBUCT00000000035
- GeneID:   1005837
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg021
- GeneTree:   EBGT00050000008046
- HOGENOM:   HBG303311
- OMA:   DNAECIV
- ProtClustDB:   PRK00529
- BioCyc:   BAPH198804:BUSG021-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 21469; Mature: 21469

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVYHSNNFRSGRKIIFEKEPCLIESSEFVKPGKGQSFVRVKLRKLLTKQLIEKTFKSTD
CEEEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SLEIADVSEYTLSYLYNDGHFWYFINNNFEELSVDKKIVGVNKKWLSEQDTCVITFWNNQ
CEEEEECHHEEEEEEEECCEEEEEECCCHHHEECCEEEEECCHHHCCCCCCEEEEEECCE
AISITPNIFVELKVIDTEIALKSDTINTTTKLATLSTGAILKVPLFIQIGSLIKVDTRSG
EEEECCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEECCEEEEECCCC
EYVSRIK
CCCCCCC
>Mature Secondary Structure
MRVYHSNNFRSGRKIIFEKEPCLIESSEFVKPGKGQSFVRVKLRKLLTKQLIEKTFKSTD
CEEEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SLEIADVSEYTLSYLYNDGHFWYFINNNFEELSVDKKIVGVNKKWLSEQDTCVITFWNNQ
CEEEEECHHEEEEEEEECCEEEEEECCCHHHEECCEEEEECCHHHCCCCCCEEEEEECCE
AISITPNIFVELKVIDTEIALKSDTINTTTKLATLSTGAILKVPLFIQIGSLIKVDTRSG
EEEECCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEECCEEEEECCCC
EYVSRIK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438