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The map label for this gene is yuaY [H]

Identifier: 30263960

GI number: 30263960

Start: 3772635

End: 3773456

Strand: Reverse

Name: yuaY [H]

Synonym: BA_4098

Alternate gene names: 30263960

Gene position: 3773456-3772635 (Counterclockwise)

Preceding gene: 270000538

Following gene: 30263959

Centisome position: 72.19

GC content: 32.36

Gene sequence:

>822_bases
ATGTATTATCATATTAGAATTAATTTAACAACTAGAGTTCAAGAGTCAAAGTTTAATATTACATTTGAAGAACTTGAAGA
ACGTTACCTTTCAAGGTATAGAAAAGGCGAAGATTTTACATTAAACGGAAGGGTAATAAAAATAAATGATATTCAAAAAA
TGAGTATAAATGTATCTGAGAATGAAAATGAATTGGATATTCTGGTAGATAGAATCGAATATGAAGATCAAAAGAGCTCT
ATCGTTAGAGTAGGTGGCCCTTCAAGAAAATGGAGAGCGGCAGGAAGATTGAAAGATGTAAGTGACGAGCTTCTTGAAGG
ACCTCCAGGTTATATGTTAAAAGAAGCAGAGGTTGCAGCTAGCGTGGAAGTTGATAACACTAAAGTATTCATCGTACATG
GACATGATGATAATTTAAAACAGCAATTAGAAATATTCTTGAATAGTATTGGTATAAAGCCTGTAGTATTACATAGGGAA
GCTAATGAAGGGTTAACAGTTCTTGAGAAGTTTGAGAAACATTCAGATGTTCAATATGCGTTTGTTCTATTAACTCCTGA
TGATATAGGGTGTAGTGTAAAGGAAAGAGCAAAATCCGTAGAAGAATATAGCTTTAGAGCTCGCCAAAATGTAATTTTTG
AATTGGGATTCTTTATTGGAAAATTAGGAAGAGCTAAGGTTTGTACTCTTTATAAAGACGGTGTGGAATTACCGAATGAT
ATATCAGGTCTGGTTTATCAAAAAGTAAATGATAATATTGAAGATGTTGGATATCATATTATGAAAGAATTAAGGGCAGC
TGGATTAAAAGTTACGTATTAA

Upstream 100 bases:

>100_bases
TATGTATGAAATTTAGGGTTATTTCTTACTTAAAATATATAAATCGTTTAAAATATTAAGTGATGTAAATTATTACTATT
AAGGAAAGTCGAGGGATATT

Downstream 100 bases:

>100_bases
TAAAATCGCGAACTGTTTGCGGACTATTTGTGAACTATTTACGGACACGATTTGGTTTTTAACATGATATATTTGTATTG
TGAGAAGTGGCGGAAAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYYHIRINLTTRVQESKFNITFEELEERYLSRYRKGEDFTLNGRVIKINDIQKMSINVSENENELDILVDRIEYEDQKSS
IVRVGGPSRKWRAAGRLKDVSDELLEGPPGYMLKEAEVAASVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHRE
ANEGLTVLEKFEKHSDVQYAFVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPND
ISGLVYQKVNDNIEDVGYHIMKELRAAGLKVTY

Sequences:

>Translated_273_residues
MYYHIRINLTTRVQESKFNITFEELEERYLSRYRKGEDFTLNGRVIKINDIQKMSINVSENENELDILVDRIEYEDQKSS
IVRVGGPSRKWRAAGRLKDVSDELLEGPPGYMLKEAEVAASVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHRE
ANEGLTVLEKFEKHSDVQYAFVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPND
ISGLVYQKVNDNIEDVGYHIMKELRAAGLKVTY
>Mature_273_residues
MYYHIRINLTTRVQESKFNITFEELEERYLSRYRKGEDFTLNGRVIKINDIQKMSINVSENENELDILVDRIEYEDQKSS
IVRVGGPSRKWRAAGRLKDVSDELLEGPPGYMLKEAEVAASVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHRE
ANEGLTVLEKFEKHSDVQYAFVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPND
ISGLVYQKVNDNIEDVGYHIMKELRAAGLKVTY

Specific function: Unknown

COG id: COG4271

COG function: function code K; Predicted nucleotide-binding protein containing TIR -like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019302
- InterPro:   IPR014571 [H]

Pfam domain/function: PF10137 TIR-like [H]

EC number: NA

Molecular weight: Translated: 31339; Mature: 31339

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYHIRINLTTRVQESKFNITFEELEERYLSRYRKGEDFTLNGRVIKINDIQKMSINVSE
CEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEECCEEEEEECCEEEEEEECC
NENELDILVDRIEYEDQKSSIVRVGGPSRKWRAAGRLKDVSDELLEGPPGYMLKEAEVAA
CCCCCCEEEEHHHCCCCCCCEEEECCCCCHHHHCCCCHHCHHHHHCCCCCCEEECCCEEE
SVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHREANEGLTVLEKFEKHSDVQYA
EEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
FVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPND
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
ISGLVYQKVNDNIEDVGYHIMKELRAAGLKVTY
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MYYHIRINLTTRVQESKFNITFEELEERYLSRYRKGEDFTLNGRVIKINDIQKMSINVSE
CEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEECCEEEEEECCEEEEEEECC
NENELDILVDRIEYEDQKSSIVRVGGPSRKWRAAGRLKDVSDELLEGPPGYMLKEAEVAA
CCCCCCEEEEHHHCCCCCCCEEEECCCCCHHHHCCCCHHCHHHHHCCCCCCEEECCCEEE
SVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHREANEGLTVLEKFEKHSDVQYA
EEEECCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
FVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPND
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
ISGLVYQKVNDNIEDVGYHIMKELRAAGLKVTY
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12761110 [H]