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The map label for this gene is sepF

Identifier: 30263901

GI number: 30263901

Start: 3718047

End: 3718517

Strand: Reverse

Name: sepF

Synonym: BA_4038

Alternate gene names: 30263901

Gene position: 3718517-3718047 (Counterclockwise)

Preceding gene: 30263902

Following gene: 30263900

Centisome position: 71.14

GC content: 37.15

Gene sequence:

>471_bases
ATGAGTTGGTCAAAAGTAAAATACTTCTTTTTTGATACACCTGAAGAAAAAGAAGCAGCTCAATATAGTTATGAAAAGGA
GCAAACAGACATGAAGAAGCAGCAAGATCCGCCAGAACAACAAGATGTTACGTTTCCAAAAGCGCAACCGAAACAAAATG
TTGTGAGCATTGAAACAGCAAAGCAATCTTCAAAAGTTGTTTTATTAGAACCACGCACATATTCAGAAGCGCAAGGAATT
GCGGACCATTTAAAAGGTAGACGAGCTGTTGTAATTAATTTACAACGAATGTCTACTGATCAAGCTGTACGTATCGTTGA
CTTTTTAAGTGGTACTGTATACGCTATAGGCGGGGACATTCAAAAAATAGGACCGAAAACATTTATGTGTACGCCTGAAA
ATGTAGATATTGTTGGTGCAATTTCAGAGTTATTCGGTGAAGAAGACGACACAAATATAAAGAGGTGGTAA

Upstream 100 bases:

>100_bases
ATGTCTAATGATTACACGATTGCAATTGAAGAAGGTGCTACATATATTCGTTTGGGGACGATTTTAGTAGGAAAAGCGTA
AAAGGAAGGAGAATCTTATT

Downstream 100 bases:

>100_bases
TACGCCATGGAAACAGTTTTAAGGCTTTTAGTTACTGCTATCGAGATATACTCGTGGGCACTTATTATTTACATTCTCCT
ATCATGGTTCCCAGGTGCAA

Product: ylmF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSWSKVKYFFFDTPEEKEAAQYSYEKEQTDMKKQQDPPEQQDVTFPKAQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGI
ADHLKGRRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKIGPKTFMCTPENVDIVGAISELFGEEDDTNIKRW

Sequences:

>Translated_156_residues
MSWSKVKYFFFDTPEEKEAAQYSYEKEQTDMKKQQDPPEQQDVTFPKAQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGI
ADHLKGRRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKIGPKTFMCTPENVDIVGAISELFGEEDDTNIKRW
>Mature_155_residues
SWSKVKYFFFDTPEEKEAAQYSYEKEQTDMKKQQDPPEQQDVTFPKAQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGIA
DHLKGRRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKIGPKTFMCTPENVDIVGAISELFGEEDDTNIKRW

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_BACAA (C3P669)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868135.1
- EnsemblBacteria:   EBBACT00000125813
- GeneID:   7849890
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_4064
- GeneTree:   EBGT00050000002769
- ProtClustDB:   CLSK2391394
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 17725; Mature: 17594

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSKVKYFFFDTPEEKEAAQYSYEKEQTDMKKQQDPPEQQDVTFPKAQPKQNVVSIETA
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
KQSSKVVLLEPRTYSEAQGIADHLKGRRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDI
CCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEECCCH
QKIGPKTFMCTPENVDIVGAISELFGEEDDTNIKRW
HHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SWSKVKYFFFDTPEEKEAAQYSYEKEQTDMKKQQDPPEQQDVTFPKAQPKQNVVSIETA
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
KQSSKVVLLEPRTYSEAQGIADHLKGRRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDI
CCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEECCCH
QKIGPKTFMCTPENVDIVGAISELFGEEDDTNIKRW
HHCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA