Click here to switch to the map view.

The map label for this gene is 30263536

Identifier: 30263536

GI number: 30263536

Start: 3355757

End: 3356794

Strand: Reverse

Name: 30263536

Synonym: BA_3647

Alternate gene names: NA

Gene position: 3356794-3355757 (Counterclockwise)

Preceding gene: 30263537

Following gene: 30263535

Centisome position: 64.22

GC content: 32.85

Gene sequence:

>1038_bases
ATGGAGAATCACTCTTCTTCAAGAGAAAGGAAATATAAACGAAAATATAAAAAGACAACGATAATAAGTTCACTACTAGC
GGTATTACTATTTGGTGGAGTTGGATATGGTGCTTATGTATATATGAAAACTTCTAATCTCGTACAAAAGTCAAATGTTA
ATTTAGCACGTGGTGAAAAATCAAATTTACGTGAGGAAACTGTTAAACCGATCACCAATAATGTTTCACTTTTAATTATG
GGAATTGATGAAAATCAAGAACGACAAAAAGAGTATAATGGTGCATTTCATACAGATGCGCTACTGTTAGCTACTTTTAA
TAAAGACGATAAAACAGTGAAACTAACGAGCATACCACGTGATACATACACATATGTTCCGGTTGAAAAGAAAAAAGATA
AAATAACGCATGCATATGGAAGTGGTTTCGTTAAAAAAGGTAAAGATGGAGGACCGCAAGCTTCAGTGGAAGCGGTAGAA
AAATTATTACAAGTGCCTGTTGATTATTTTGTGAAGTTTAATTTTAATTCATTTACTAAAATTATTGATGGGTTAGATGG
GATTGAAGTAGATGTTCCAGTTGAATTTACGGAGCAAAATAGTAAAGATGAACCTGATGCGATCCATTTGAAAAAAGGAC
TACAAAAATTAAATGGGGAAGAAGCACTTGCTCTAGCAAGAACGCGTCATATTGATAGTGATGCAATGAGAGGGCAGCGG
CAACAACTTGTTATGGAAGCGATTTTAAGTAAATTAAAAAGTGTAGGATCAATTACGAAGCTAGAAAAAATAGTTGAGGC
GGTTGACGGTGATTTTAAAACAAATTTAGCAATGGATGATATTTTATCTTTTTATAAATACGGTTTAAATTGTTCGGTTG
AAAAAATTCAATTAGCAGGTGATGATTTATACTTACCTAATGGCCCAAACGGCCAACGTGTATATTATTATAATCCTAAT
AAAAAAGATTTACAGAGTTTGAGTAATACTCTTAGGACACATCTAGGATTAAGTGAAAAGGAGATTGAGGAAAATTGA

Upstream 100 bases:

>100_bases
ACAAATAAACAAAGGATTGAAAGAGAATGTATTTCAAAAGGATAGCACTAATTATGAAAAAATGAAAAACATTTTATCTG
AATAAAAAGGGGATAATTAT

Downstream 100 bases:

>100_bases
AGCAGGCGAAATGTCTGCTTTTTATTATGTCTAATAGTATGTCGTTTATCATTGAATGTTATATACTATTTTCAAAAATA
ATATAATAGTGTAACATAAA

Product: LytR family transcription antiterminator

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MENHSSSRERKYKRKYKKTTIISSLLAVLLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKKGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIIDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN

Sequences:

>Translated_345_residues
MENHSSSRERKYKRKYKKTTIISSLLAVLLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKKGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIIDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN
>Mature_345_residues
MENHSSSRERKYKRKYKKTTIISSLLAVLLFGGVGYGAYVYMKTSNLVQKSNVNLARGEKSNLREETVKPITNNVSLLIM
GIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPRDTYTYVPVEKKKDKITHAYGSGFVKKGKDGGPQASVEAVE
KLLQVPVDYFVKFNFNSFTKIIDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAGDDLYLPNGPNGQRVYYYNPN
KKDLQSLSNTLRTHLGLSEKEIEEN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 38803; Mature: 38803

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENHSSSRERKYKRKYKKTTIISSLLAVLLFGGVGYGAYVYMKTSNLVQKSNVNLARGEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCEECCCH
SNLREETVKPITNNVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPR
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKKGKDGGPQASVEAVEKLLQVPVDYFVKFNFNSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCHHHH
IIDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKEIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MENHSSSRERKYKRKYKKTTIISSLLAVLLFGGVGYGAYVYMKTSNLVQKSNVNLARGEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCEECCCH
SNLREETVKPITNNVSLLIMGIDENQERQKEYNGAFHTDALLLATFNKDDKTVKLTSIPR
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCC
DTYTYVPVEKKKDKITHAYGSGFVKKGKDGGPQASVEAVEKLLQVPVDYFVKFNFNSFTK
CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCHHHH
IIDGLDGIEVDVPVEFTEQNSKDEPDAIHLKKGLQKLNGEEALALARTRHIDSDAMRGQR
HHCCCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCHH
QQLVMEAILSKLKSVGSITKLEKIVEAVDGDFKTNLAMDDILSFYKYGLNCSVEKIQLAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
DDLYLPNGPNGQRVYYYNPNKKDLQSLSNTLRTHLGLSEKEIEEN
CEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]