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The map label for this gene is ywcH [H]

Identifier: 30262043

GI number: 30262043

Start: 1896002

End: 1897003

Strand: Reverse

Name: ywcH [H]

Synonym: BA_2016

Alternate gene names: 30262043

Gene position: 1897003-1896002 (Counterclockwise)

Preceding gene: 30262044

Following gene: 30262039

Centisome position: 36.29

GC content: 38.42

Gene sequence:

>1002_bases
ATGATCAAATTAAGTGTATTAGACCAATCCCCTATTTCAGATGGTAGTACAGCAACCCAAGCTTTTTCACATACAGTTAC
GCTTGCGCAAGAAGTTGAAAAACTCGGATATACACGCTTTTGGGTATCAGAGCATCACAATTCTGTAAGCCTTGCTGGTT
CAAGTCCAGAAATACTTATTTCTCATATTGCAGCAAAAACGGAGCGTATGAGAGTTGGTTCGGGTGGTGTTATGTTACCT
CACTATAGCCCGTATAAAGTTGCTGAGAATTTCCGTGTTTTAGAAGCGCTTTATCCAAATCGTATTGACCTTGGTGTCGG
CAGAGCACCTGGCGGTATGCCAATTGCAACTCGCGCACTTCAAGAAGGAAAAATGGTCTCACTTGATCAATATCCAGAAC
AAATTGCAGATGTTGCAATGTATTTACATGATCAAGTACCAGAAAACCATCATTATGCGAATTTAAAAGCTACTCCTGTG
ATTCCAACATCTCCCGACATGTGGTTGCTTGGCTCTAGTGGAGAGAGTGCAAAGATCGCTGCACAGCAAGGTGCTTCTTT
TGCATTCGCACAGTTCATAAACGGATACGGTGGACCCGAGGTAATGGAGGCCTATCAAAAACAATTCCAACCTTCCTATT
TAGGAGATAAACCAAAATCAATCGTCGCTATTTTTGTTATTTGCGGAGAAACAAATGAAGAGGCGGAAAAAATTGCTTCA
AGTTTAGATTTATCAATCTTATTACTAGAACAAGGAAAGCGTACAACTGGTACTCCTTCTATCGAAACTGCTCAAAATTA
TTCATATAGCACGTATGATTTATTCCGTATAAAAGAAAATCGTCAACGTATGATAGTAGGCGACCCGTCTTCTGTAAAAG
AAAAAATCATAAACTTAAGCAAAGCGTACAATACTGAAGAATTTATGATTGTCACAATTACTCATCGATTTGAAGATAAA
TTAAATTCTTATCGCTTATTGGCAAATGCTTTTAATTTATAA

Upstream 100 bases:

>100_bases
GATATATAATTTATCCACTTTTAATTTTGAGCATTTCATTACGCATTTTTCGTAAGTAAATATATAATAGGATGTACATT
AAGATTGAGAGGTATATTCT

Downstream 100 bases:

>100_bases
TTTTAAAAAGGAGATACATCACATATGATGCATCTCCTTTTCTTACTACTTATTGTTTTCATTCCCTATATATTCAATGG
CTTCTTTCAATACCTCATCA

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSTYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFNL

Sequences:

>Translated_333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSTYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFNL
>Mature_333_residues
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILISHIAAKTERMRVGSGGVMLP
HYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRALQEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPV
IPTSPDMWLLGSSGESAKIAAQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEKIAS
SLDLSILLLEQGKRTTGTPSIETAQNYSYSTYDLFRIKENRQRMIVGDPSSVKEKIINLSKAYNTEEFMIVTITHRFEDK
LNSYRLLANAFNL

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=33.5384615384615, Blast_Score=202, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36831; Mature: 36831

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHH
SHIAAKTERMRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPDMWLLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCCEEE
AQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEKIAS
HHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSTYDLFRIKENRQRMIVGDPSSVKEKIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTEEFMIVTITHRFEDKLNSYRLLANAFNL
HHCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKLSVLDQSPISDGSTATQAFSHTVTLAQEVEKLGYTRFWVSEHHNSVSLAGSSPEILI
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHH
SHIAAKTERMRVGSGGVMLPHYSPYKVAENFRVLEALYPNRIDLGVGRAPGGMPIATRAL
HHHHHHHHHEEECCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
QEGKMVSLDQYPEQIADVAMYLHDQVPENHHYANLKATPVIPTSPDMWLLGSSGESAKIA
HCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEECEEECCCCCCCCCEEEEECCCCCCEEE
AQQGASFAFAQFINGYGGPEVMEAYQKQFQPSYLGDKPKSIVAIFVICGETNEEAEKIAS
HHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
SLDLSILLLEQGKRTTGTPSIETAQNYSYSTYDLFRIKENRQRMIVGDPSSVKEKIINLS
HCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHH
KAYNTEEFMIVTITHRFEDKLNSYRLLANAFNL
HHCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]