Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748603
Identifier: 77748603
GI number: 77748603
Start: 1937760
End: 1939085
Strand: Reverse
Name: 77748603
Synonym: XAC1680
Alternate gene names: NA
Gene position: 1939085-1937760 (Counterclockwise)
Preceding gene: 21242430
Following gene: 21242428
Centisome position: 37.47
GC content: 66.67
Gene sequence:
>1326_bases ATGAATCGCCTGTTCGCCATTGGCCTGATCGCCGCGTTCACCGGCCTGGGCGCGCCCTCCAACGCGCACGCTGCCGCAGC CCTGCAGGAGCCGGCGACGGATGTTGCCGGCACCGCCCCGCCACTGGCCGATGCGCAAACGCCCGACAGCAGCCGCGACA TCCTGCTGGCGGTGGCCAACCCGCTCGCCGCGCCACCGGCCCGCGCCGGCTCCAGCCTGATCGGCTACGCATCCAGCTAT TACGGCGCCGGCCAGAAGGCTGCCGCGCGCATGGACAGCATCAAGCAGCGCTACAAACTGCACGAAGTCTCGGCCTGGCC AATCACCTCGCTGGGCCTGTATTGCGCTGTGCTGCAACCGCCGCCGGGCGTGTCGCGCGATGAACTGGTCAGTGCACTGG CCGACGACGAAGGCGTGGAGCTGGTGCAGCCAGTGCAGGATTTTTCGGTGTTCTCCACCGATGCGTCGGAAAAGACGACC TCGCTGTCCAGCTACAACGACCCGTACGTGGACATGCAACGCGGCTTCATCGACACCGATGCCGCCAGCGCACAGACCGT GACCGAGGGCCGCGGCGTGGTGATCGCGGTCGTCGATACCGGCGTGGACACCGACCACCCCGATCTGAAGGCGCGCATCC GCGACGTGCACGATCTGGTCGACGACAAACCGGTGAAGACCAGCACCGATTCGCACGGTACCGAAGTGGCCGGCATCATT GCCGCCGGCAGCAACAATCACCAGGGCATCGTCGGCATGGCACCCAAGGCCATGCTGAGTATCTACAAGGCGTGCTGGTA CGCGCCCACGGTCGGCGCCACCGCACGGTGCAATACCTTCACCCTGGCCAAGGCGCTGGCGGCGATCGACAACAGCTCCG CGCGCGTGATCAACCTGAGCCTGGGTGGCCCCGCCGATCCGCTGTTGAGCAAGATGCTGCAGCAGCTGGTGCAACAGGGC CGCATCGTGGTGGCGGCAATGCCACCGAACGGGCGTCTGGATGGCTTTCCCAATGACGTACCCGGCGTGCTGGTCGTGCG CAGCAGCAGCGCAACACCGGCCATGCCCGGCGTGCTCAGCGCACCCGGCAAGGACATCCTGACCACGCAACCGAACGGCC GCTACGATTTCACCTCCGGCTCGTCGATGGCCACCGCACATGTCAGCGGCATGGCCGCGCTGCTGTTGTCGCTGCAACCA TCGATGGATGCCAAGGCGTTGCGCGAGCTCATGCAGCGCACCAGCAAGGTCTCCGACGGGCAGTTGCAGGTCAACGCAGG CGCCGCAGTGCAGGCGCTGGCGCCTCCCGCCAAACACTCCAACTGA
Upstream 100 bases:
>100_bases TGGTGCCTGCCGCCCCGCAGCCCCCGGCCCAACCGCAGCAGACCGTGCAGCAACTACGCGCCACCCCAGGCATCCGGCTG GCGGAGATCGTCTCGGCCCC
Downstream 100 bases:
>100_bases CGGCACCGGCATGGCCAAGTGGATTCCCTTGTGGCTGCATCAACTCAGCTCGCCGCCGACCTTCTATCGTGTCGCCGGCA GCGTGCGCCCGTGGGCGCTG
Product: serine protease
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MNRLFAIGLIAAFTGLGAPSNAHAAAALQEPATDVAGTAPPLADAQTPDSSRDILLAVANPLAAPPARAGSSLIGYASSY YGAGQKAAARMDSIKQRYKLHEVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSTDASEKTT SLSSYNDPYVDMQRGFIDTDAASAQTVTEGRGVVIAVVDTGVDTDHPDLKARIRDVHDLVDDKPVKTSTDSHGTEVAGII AAGSNNHQGIVGMAPKAMLSIYKACWYAPTVGATARCNTFTLAKALAAIDNSSARVINLSLGGPADPLLSKMLQQLVQQG RIVVAAMPPNGRLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGKDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQP SMDAKALRELMQRTSKVSDGQLQVNAGAAVQALAPPAKHSN
Sequences:
>Translated_441_residues MNRLFAIGLIAAFTGLGAPSNAHAAAALQEPATDVAGTAPPLADAQTPDSSRDILLAVANPLAAPPARAGSSLIGYASSY YGAGQKAAARMDSIKQRYKLHEVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSTDASEKTT SLSSYNDPYVDMQRGFIDTDAASAQTVTEGRGVVIAVVDTGVDTDHPDLKARIRDVHDLVDDKPVKTSTDSHGTEVAGII AAGSNNHQGIVGMAPKAMLSIYKACWYAPTVGATARCNTFTLAKALAAIDNSSARVINLSLGGPADPLLSKMLQQLVQQG RIVVAAMPPNGRLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGKDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQP SMDAKALRELMQRTSKVSDGQLQVNAGAAVQALAPPAKHSN >Mature_441_residues MNRLFAIGLIAAFTGLGAPSNAHAAAALQEPATDVAGTAPPLADAQTPDSSRDILLAVANPLAAPPARAGSSLIGYASSY YGAGQKAAARMDSIKQRYKLHEVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSTDASEKTT SLSSYNDPYVDMQRGFIDTDAASAQTVTEGRGVVIAVVDTGVDTDHPDLKARIRDVHDLVDDKPVKTSTDSHGTEVAGII AAGSNNHQGIVGMAPKAMLSIYKACWYAPTVGATARCNTFTLAKALAAIDNSSARVINLSLGGPADPLLSKMLQQLVQQG RIVVAAMPPNGRLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGKDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQP SMDAKALRELMQRTSKVSDGQLQVNAGAAVQALAPPAKHSN
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 45648; Mature: 45648
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLFAIGLIAAFTGLGAPSNAHAAAALQEPATDVAGTAPPLADAQTPDSSRDILLAVAN CCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECC PLAAPPARAGSSLIGYASSYYGAGQKAAARMDSIKQRYKLHEVSAWPITSLGLYCAVLQP CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECC PPGVSRDELVSALADDEGVELVQPVQDFSVFSTDASEKTTSLSSYNDPYVDMQRGFIDTD CCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHCCCCCCCCCCHHHHCCCCCCC AASAQTVTEGRGVVIAVVDTGVDTDHPDLKARIRDVHDLVDDKPVKTSTDSHGTEVAGII CCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE AAGSNNHQGIVGMAPKAMLSIYKACWYAPTVGATARCNTFTLAKALAAIDNSSARVINLS EECCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE LGGPADPLLSKMLQQLVQQGRIVVAAMPPNGRLDGFPNDVPGVLVVRSSSATPAMPGVLS CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC APGKDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQPSMDAKALRELMQRTSKVSDG CCCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC QLQVNAGAAVQALAPPAKHSN EEEEECCCEEEECCCCCCCCC >Mature Secondary Structure MNRLFAIGLIAAFTGLGAPSNAHAAAALQEPATDVAGTAPPLADAQTPDSSRDILLAVAN CCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECC PLAAPPARAGSSLIGYASSYYGAGQKAAARMDSIKQRYKLHEVSAWPITSLGLYCAVLQP CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECC PPGVSRDELVSALADDEGVELVQPVQDFSVFSTDASEKTTSLSSYNDPYVDMQRGFIDTD CCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHCCCCCCCCCCHHHHCCCCCCC AASAQTVTEGRGVVIAVVDTGVDTDHPDLKARIRDVHDLVDDKPVKTSTDSHGTEVAGII CCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE AAGSNNHQGIVGMAPKAMLSIYKACWYAPTVGATARCNTFTLAKALAAIDNSSARVINLS EECCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE LGGPADPLLSKMLQQLVQQGRIVVAAMPPNGRLDGFPNDVPGVLVVRSSSATPAMPGVLS CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC APGKDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQPSMDAKALRELMQRTSKVSDG CCCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC QLQVNAGAAVQALAPPAKHSN EEEEECCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]