Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is cls [H]
Identifier: 21245022
GI number: 21245022
Start: 5096421
End: 5097644
Strand: Direct
Name: cls [H]
Synonym: XAC4310
Alternate gene names: 21245022
Gene position: 5096421-5097644 (Clockwise)
Preceding gene: 21245021
Following gene: 21245024
Centisome position: 98.47
GC content: 65.2
Gene sequence:
>1224_bases GTGGGGCTGCTGCTGCTCAACTTCGCCACGCCGGAGAAAAAGCTCGAGCACATCCCCAAACACCTCTACGACGTTGCCGA TCCGCAATTCAAACGCGAGATGTCGGTGTTGCTGGGGCCGGCCATCCTGCCCGGCAACAGGATCGACGTGCTCAATAACG GCCGCGAGATCTTTCCGGCCATGCTGGAGGCCATCCGCAGCGCGCAGCACACCATCACGTTCGAAACCTATATCTATTGG TCGGGCGAGATCGGCCGAGAATTCAGCGACGCCTTGTCCGAGCGCGCGCGCGCCGGGGTGGATGTGCGGGTCACCATCGA CTGGGGCGGCAGCCTGAAGATGGACCATGCACTGGTAGACACCATGACCGAGGCCGGCGTGGACGTGCACCGCTACCGCC CGCTGGCCTGGTACAACCTGCACCGCATCAACAACCGCACGCACCGCAAGCTGCTGGTGATCGACGGCCGTATCGGCTTC ACCGGCGGCGTGGGCGTGGCCGACCAGTGGATGGGCGACGCGCAGGATCCGGACCATTGGCGCGACACCCACTACCGCAT CGAAGGCCCGGTGGTGGCGCAGGTGCAGACCGCCTTCAACGACAACTGGATCAAGACCACCGGCCGCGTGGTCAATGGCG CCCGGTACTACCCGGCGCTGGAGGCGGTCGGCGACAGCGATGCGCAGTTGTTCGTGGCCTCGCCGGCCGGCGGCAGCGAA AGCATGCACCTGATGTATCTGATCGCCATCGCCGCCGCATGCAGCACCATCGACCTGGCCGCGGCGTATTTCGTGCCCGA TGCGCTGATCACCCGCGCGCTGCTGGAAGCGCGCAGTCGCGGCGTCAGCATCCGCGTGCTGCTGCCCGGCAAGCACATCG ATGCGGTGTCGGTGCGGCTGGCCTCCAAGGCCAGCTGGGAGCCACTGCTGCAGGCCGGCATCGAGATCCACGAATACCAG CCCACCATGCTGCATACCAAACTGCTGATCATCGACGGCCTGTTGGTCTCGGTAGGCTCCACCAATTTCGACATCCGCTC GTTCCGCCTCAACGACGAGGCCAGCCTGAATGTCTACGACCGCACGCTGGCTGCACGCATGACCGAGGTGTTCGAGCGCG ATCTGCAACGCGCCGAGCAGTATTCGCTGGAGCGCTGGCGCGCGCGGCCGTTGCGGCAGAAGCTTGGCGAGAAACTGGTG TTCCCGTTCCGCTCGCAGGTGTGA
Upstream 100 bases:
>100_bases CTTGCCAGAATGCCGGCCGCTTGGGGCTGTCGATGGCAGGGGAACCGGAGTTGGATGCATGACATGGATCATCGTGGCCG CCGTGGCGGTCACCTTGCTG
Downstream 100 bases:
>100_bases GCGCGCAGGGCCGATAACGGCGGTGTTAGCGTGCCGCCCCCGCCGCGCCTGCCTGCAAGCGCAGCTGACGCAGGCGCCAC CACAGCCCGCCCACGTGCAC
Product: cardiolipin synthetase
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase 1 [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MGLLLLNFATPEKKLEHIPKHLYDVADPQFKREMSVLLGPAILPGNRIDVLNNGREIFPAMLEAIRSAQHTITFETYIYW SGEIGREFSDALSERARAGVDVRVTIDWGGSLKMDHALVDTMTEAGVDVHRYRPLAWYNLHRINNRTHRKLLVIDGRIGF TGGVGVADQWMGDAQDPDHWRDTHYRIEGPVVAQVQTAFNDNWIKTTGRVVNGARYYPALEAVGDSDAQLFVASPAGGSE SMHLMYLIAIAAACSTIDLAAAYFVPDALITRALLEARSRGVSIRVLLPGKHIDAVSVRLASKASWEPLLQAGIEIHEYQ PTMLHTKLLIIDGLLVSVGSTNFDIRSFRLNDEASLNVYDRTLAARMTEVFERDLQRAEQYSLERWRARPLRQKLGEKLV FPFRSQV
Sequences:
>Translated_407_residues MGLLLLNFATPEKKLEHIPKHLYDVADPQFKREMSVLLGPAILPGNRIDVLNNGREIFPAMLEAIRSAQHTITFETYIYW SGEIGREFSDALSERARAGVDVRVTIDWGGSLKMDHALVDTMTEAGVDVHRYRPLAWYNLHRINNRTHRKLLVIDGRIGF TGGVGVADQWMGDAQDPDHWRDTHYRIEGPVVAQVQTAFNDNWIKTTGRVVNGARYYPALEAVGDSDAQLFVASPAGGSE SMHLMYLIAIAAACSTIDLAAAYFVPDALITRALLEARSRGVSIRVLLPGKHIDAVSVRLASKASWEPLLQAGIEIHEYQ PTMLHTKLLIIDGLLVSVGSTNFDIRSFRLNDEASLNVYDRTLAARMTEVFERDLQRAEQYSLERWRARPLRQKLGEKLV FPFRSQV >Mature_406_residues GLLLLNFATPEKKLEHIPKHLYDVADPQFKREMSVLLGPAILPGNRIDVLNNGREIFPAMLEAIRSAQHTITFETYIYWS GEIGREFSDALSERARAGVDVRVTIDWGGSLKMDHALVDTMTEAGVDVHRYRPLAWYNLHRINNRTHRKLLVIDGRIGFT GGVGVADQWMGDAQDPDHWRDTHYRIEGPVVAQVQTAFNDNWIKTTGRVVNGARYYPALEAVGDSDAQLFVASPAGGSES MHLMYLIAIAAACSTIDLAAAYFVPDALITRALLEARSRGVSIRVLLPGKHIDAVSVRLASKASWEPLLQAGIEIHEYQP TMLHTKLLIIDGLLVSVGSTNFDIRSFRLNDEASLNVYDRTLAARMTEVFERDLQRAEQYSLERWRARPLRQKLGEKLVF PFRSQV
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=401, Percent_Identity=28.1795511221945, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1787007, Length=350, Percent_Identity=30.2857142857143, Blast_Score=148, Evalue=7e-37, Organism=Escherichia coli, GI87081826, Length=409, Percent_Identity=24.6943765281174, Blast_Score=95, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 45730; Mature: 45599
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLLLNFATPEKKLEHIPKHLYDVADPQFKREMSVLLGPAILPGNRIDVLNNGREIFPA CCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHH MLEAIRSAQHTITFETYIYWSGEIGREFSDALSERARAGVDVRVTIDWGGSLKMDHALVD HHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHH TMTEAGVDVHRYRPLAWYNLHRINNRTHRKLLVIDGRIGFTGGVGVADQWMGDAQDPDHW HHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC RDTHYRIEGPVVAQVQTAFNDNWIKTTGRVVNGARYYPALEAVGDSDAQLFVASPAGGSE CCCCEEECCCEEEEEEHHCCCCEEEECCCEECCCCCCCHHHHCCCCCCEEEEECCCCCCC SMHLMYLIAIAAACSTIDLAAAYFVPDALITRALLEARSRGVSIRVLLPGKHIDAVSVRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEE ASKASWEPLLQAGIEIHEYQPTMLHTKLLIIDGLLVSVGSTNFDIRSFRLNDEASLNVYD CCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHH RTLAARMTEVFERDLQRAEQYSLERWRARPLRQKLGEKLVFPFRSQV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEECCHHCCC >Mature Secondary Structure GLLLLNFATPEKKLEHIPKHLYDVADPQFKREMSVLLGPAILPGNRIDVLNNGREIFPA CEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCCEEEEECCCHHHHHH MLEAIRSAQHTITFETYIYWSGEIGREFSDALSERARAGVDVRVTIDWGGSLKMDHALVD HHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHH TMTEAGVDVHRYRPLAWYNLHRINNRTHRKLLVIDGRIGFTGGVGVADQWMGDAQDPDHW HHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC RDTHYRIEGPVVAQVQTAFNDNWIKTTGRVVNGARYYPALEAVGDSDAQLFVASPAGGSE CCCCEEECCCEEEEEEHHCCCCEEEECCCEECCCCCCCHHHHCCCCCCEEEEECCCCCCC SMHLMYLIAIAAACSTIDLAAAYFVPDALITRALLEARSRGVSIRVLLPGKHIDAVSVRL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEE ASKASWEPLLQAGIEIHEYQPTMLHTKLLIIDGLLVSVGSTNFDIRSFRLNDEASLNVYD CCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHH RTLAARMTEVFERDLQRAEQYSLERWRARPLRQKLGEKLVFPFRSQV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8846791; 9353933; 9384377 [H]