Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is hemH [H]
Identifier: 21244937
GI number: 21244937
Start: 4978623
End: 4979585
Strand: Direct
Name: hemH [H]
Synonym: XAC4220
Alternate gene names: 21244937
Gene position: 4978623-4979585 (Clockwise)
Preceding gene: 77748764
Following gene: 21244938
Centisome position: 96.19
GC content: 68.33
Gene sequence:
>963_bases GTGCGCATGAACACGACACCCGATACCGCCCTGCTGGTCGTCAACCTGGGCACCCCCGAATCGCCGACCGCCCCGGCCGT GCGCCGCTACCTGGCCGAGTTCCTGAGCGACCGCCGCGTGGTCGCGATTCCGCCGTTGTTCTGGAAGCCGCTGCTGTATG GGGTGATCCTGCCGATCCGCGGGCCGAAATCGGCCGAAAAATACGCCAAGGTGTGGTTGCCGGAGGGCTCGCCGCTGGCG GTCTACACGCGCCGCCTAGCCGGCGGCCTGCAAGCGGTCATGCCCGACTGGCATGTGGAATGGGCCATGCGCTACGGCGA GCCGGCGTTGCGCAAGACGCTGGACCGGCTGCGCGCACGCGGCATCAAGCGCATCGTGGTGCTGCCGCTGTATCCGCAGT ACTCGACCACCACTACCGCCTCGATCCAGGACGTGGTGGATGCATGGCGCACCAGCGCGCCGGAGATTGCGGTGGAGGTG ATCCAGGACTACTGCGAGGACACCGGCTGGGTGGCCGCGATCGCCGAGTCGATCCGCGCGCACTGGCAGGTGCATGGGCG CAGCGAAAAGTTGATGTTCTCCTTCCACGGCCTGCCGCAGCGCGTGGCCGATGCCGGCGACCCGTATCCGCAGCAGTGCG AACGCAGCGCGCAGGCGATTGTGGCAGCGCTGGGGCTGGGCGCGGACGAGTGGCAGATGGGCTACCAGTCGCGCTTCGGC GCCGAGCGCTGGCTGCAGCCGTACGCCGAACCCACGCTGTGGAAACTGGCTGAAGGCGGCGTGCGCAGTTTCGACCTGGT CTGCCCCGGCTTTGCCACCGACTGTCTGGAAACGCTGGAAGAAGTAGCGCTGGGCTTTTCCGAAACGCTGGCCGAACGTG GCGCCACCCTCAGCTACATCCCCTGCCTCAACGCCAGCGATGCGCATGCGCACGCGCTGGCCGCCATGGCGCGCCGCGCG TGA
Upstream 100 bases:
>100_bases CGCAATGAATCGGTGGTGAGCGCAACCGGCATGGAAGAGACGGCCGATCGCAGCGATCGTTGCGCTGTTGTCGGCAGCGG TGCCCGGCTCTGCCAGAATG
Downstream 100 bases:
>100_bases AGTTGGAGCCGTTTGCATGCGACCTGGCCATCGGCCGGGTCACCGGATTGCGCAACCAAAATCGCGGCCCGCGCCGGGTG CTGGCCTTGCATGGCTGGCT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRMNTTPDTALLVVNLGTPESPTAPAVRRYLAEFLSDRRVVAIPPLFWKPLLYGVILPIRGPKSAEKYAKVWLPEGSPLA VYTRRLAGGLQAVMPDWHVEWAMRYGEPALRKTLDRLRARGIKRIVVLPLYPQYSTTTTASIQDVVDAWRTSAPEIAVEV IQDYCEDTGWVAAIAESIRAHWQVHGRSEKLMFSFHGLPQRVADAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFG AERWLQPYAEPTLWKLAEGGVRSFDLVCPGFATDCLETLEEVALGFSETLAERGATLSYIPCLNASDAHAHALAAMARRA
Sequences:
>Translated_320_residues MRMNTTPDTALLVVNLGTPESPTAPAVRRYLAEFLSDRRVVAIPPLFWKPLLYGVILPIRGPKSAEKYAKVWLPEGSPLA VYTRRLAGGLQAVMPDWHVEWAMRYGEPALRKTLDRLRARGIKRIVVLPLYPQYSTTTTASIQDVVDAWRTSAPEIAVEV IQDYCEDTGWVAAIAESIRAHWQVHGRSEKLMFSFHGLPQRVADAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFG AERWLQPYAEPTLWKLAEGGVRSFDLVCPGFATDCLETLEEVALGFSETLAERGATLSYIPCLNASDAHAHALAAMARRA >Mature_320_residues MRMNTTPDTALLVVNLGTPESPTAPAVRRYLAEFLSDRRVVAIPPLFWKPLLYGVILPIRGPKSAEKYAKVWLPEGSPLA VYTRRLAGGLQAVMPDWHVEWAMRYGEPALRKTLDRLRARGIKRIVVLPLYPQYSTTTTASIQDVVDAWRTSAPEIAVEV IQDYCEDTGWVAAIAESIRAHWQVHGRSEKLMFSFHGLPQRVADAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFG AERWLQPYAEPTLWKLAEGGVRSFDLVCPGFATDCLETLEEVALGFSETLAERGATLSYIPCLNASDAHAHALAAMARRA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=327, Percent_Identity=26.2996941896024, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI60499021, Length=327, Percent_Identity=26.2996941896024, Blast_Score=101, Evalue=9e-22, Organism=Escherichia coli, GI1786681, Length=312, Percent_Identity=45.8333333333333, Blast_Score=273, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6324750, Length=328, Percent_Identity=22.8658536585366, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864156, Length=300, Percent_Identity=24.6666666666667, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35479; Mature: 35479
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMNTTPDTALLVVNLGTPESPTAPAVRRYLAEFLSDRRVVAIPPLFWKPLLYGVILPIR CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEECCC GPKSAEKYAKVWLPEGSPLAVYTRRLAGGLQAVMPDWHVEWAMRYGEPALRKTLDRLRAR CCCCHHHHHEEECCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHC GIKRIVVLPLYPQYSTTTTASIQDVVDAWRTSAPEIAVEVIQDYCEDTGWVAAIAESIRA CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH HWQVHGRSEKLMFSFHGLPQRVADAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFG HHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AERWLQPYAEPTLWKLAEGGVRSFDLVCPGFATDCLETLEEVALGFSETLAERGATLSYI HHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCEEEEE PCLNASDAHAHALAAMARRA CCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRMNTTPDTALLVVNLGTPESPTAPAVRRYLAEFLSDRRVVAIPPLFWKPLLYGVILPIR CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEECCC GPKSAEKYAKVWLPEGSPLAVYTRRLAGGLQAVMPDWHVEWAMRYGEPALRKTLDRLRAR CCCCHHHHHEEECCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHC GIKRIVVLPLYPQYSTTTTASIQDVVDAWRTSAPEIAVEVIQDYCEDTGWVAAIAESIRA CCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH HWQVHGRSEKLMFSFHGLPQRVADAGDPYPQQCERSAQAIVAALGLGADEWQMGYQSRFG HHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC AERWLQPYAEPTLWKLAEGGVRSFDLVCPGFATDCLETLEEVALGFSETLAERGATLSYI HHHHHHHCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCEEEEE PCLNASDAHAHALAAMARRA CCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]