Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244922
Identifier: 21244922
GI number: 21244922
Start: 4953153
End: 4953989
Strand: Direct
Name: 21244922
Synonym: XAC4205
Alternate gene names: NA
Gene position: 4953153-4953989 (Clockwise)
Preceding gene: 21244916
Following gene: 77748763
Centisome position: 95.7
GC content: 50.9
Gene sequence:
>837_bases GTGCCGGAAGTTCCGAAAGTCATCGACGTCAGGGATCGTCAGTTCGTCCAGATGGAGCTGGATGCGGCGTTCCATGCGCA CAAGTCGCTCTTTAGAAAGGCGTTCTGGATTAATAAGGGTATTAGCGCAGACGCCTGTGAGTTGAAGATTCATCAGCTCT TGATGGCGCAAACTGTTGGGCTGCTCATTCCGCGAACGCTGATTAGCAACAAACCTAAGGAAATTCGTGCCTTCATTGAA AGTACTGGGGAACATATCTACAAGCCATTAACCGGCTATCTGTGGCAAGAGCAAGGCTCAGTGACCCAGACATTTACCGC GAAAGTGACGGCAGAGCTATTGCCCGAGAATAGCCTGCTAGCTGCAACTCCAGGGATATTCCAAACCAAGGTTCCGAAAA AGTATGAAGCACGCATCCAGTTCTTTGGCCGTTTCTACGGCGGGGTGAGGATTGAGTCCCACACGCTGAGCGGTGGAGAC CTCGACTGGAGAATAGGACAAGGCGGCATCAAGGCGTGTGCGCCGGCAGTTCTCCCCGAAGAAATTTACCACAAATGTCT CAACCTCATGGAGCGGCTCGACATTGTCAGTGGCGGATTTGATTTCATCATTGATGAGAATGATCAATGGATCTTCCTAG AGGTCAATGAAGCCGGGCAGTTCATGTTTATTGAGACATGGTGCCAGAGTATCCCGCTCACTGAGGCGTTCTGCCAGTTC GTCGAGCGCGCAGATCCACAATTCGAGTATGAGCCAGTTTCCCAACCGCTTACTCTGAGAGAAGCCTACGAAGATGCTAA ACGTTCGGGATTGGAAACTGAGTTGGTTTTTCCCTGA
Upstream 100 bases:
>100_bases GTATCAGCTATGCAGAAAGGCATGCGGATGTAAAAATCAGCACAGGGGAGCATAACTTTAATGAAGATGATATCGGTGTC GTCTGGACAGGCGTCGGCGT
Downstream 100 bases:
>100_bases GTATTGATGCATTAGCGCATCAATTTGGTTCGCTATTCGCATGGATGGTCCATGCGTTGACGCGCAGCATTACCTGCGCA CTTACTGGAGTCGATGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: RimK Domain Protein ATP-Grasp; Rimk Domain Protein ATP-Grasp
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPEVPKVIDVRDRQFVQMELDAAFHAHKSLFRKAFWINKGISADACELKIHQLLMAQTVGLLIPRTLISNKPKEIRAFIE STGEHIYKPLTGYLWQEQGSVTQTFTAKVTAELLPENSLLAATPGIFQTKVPKKYEARIQFFGRFYGGVRIESHTLSGGD LDWRIGQGGIKACAPAVLPEEIYHKCLNLMERLDIVSGGFDFIIDENDQWIFLEVNEAGQFMFIETWCQSIPLTEAFCQF VERADPQFEYEPVSQPLTLREAYEDAKRSGLETELVFP
Sequences:
>Translated_278_residues MPEVPKVIDVRDRQFVQMELDAAFHAHKSLFRKAFWINKGISADACELKIHQLLMAQTVGLLIPRTLISNKPKEIRAFIE STGEHIYKPLTGYLWQEQGSVTQTFTAKVTAELLPENSLLAATPGIFQTKVPKKYEARIQFFGRFYGGVRIESHTLSGGD LDWRIGQGGIKACAPAVLPEEIYHKCLNLMERLDIVSGGFDFIIDENDQWIFLEVNEAGQFMFIETWCQSIPLTEAFCQF VERADPQFEYEPVSQPLTLREAYEDAKRSGLETELVFP >Mature_277_residues PEVPKVIDVRDRQFVQMELDAAFHAHKSLFRKAFWINKGISADACELKIHQLLMAQTVGLLIPRTLISNKPKEIRAFIES TGEHIYKPLTGYLWQEQGSVTQTFTAKVTAELLPENSLLAATPGIFQTKVPKKYEARIQFFGRFYGGVRIESHTLSGGDL DWRIGQGGIKACAPAVLPEEIYHKCLNLMERLDIVSGGFDFIIDENDQWIFLEVNEAGQFMFIETWCQSIPLTEAFCQFV ERADPQFEYEPVSQPLTLREAYEDAKRSGLETELVFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31652; Mature: 31520
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVPKVIDVRDRQFVQMELDAAFHAHKSLFRKAFWINKGISADACELKIHQLLMAQTVG CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LLIPRTLISNKPKEIRAFIESTGEHIYKPLTGYLWQEQGSVTQTFTAKVTAELLPENSLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEE AATPGIFQTKVPKKYEARIQFFGRFYGGVRIESHTLSGGDLDWRIGQGGIKACAPAVLPE EECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCHHHHCCCCCCH EIYHKCLNLMERLDIVSGGFDFIIDENDQWIFLEVNEAGQFMFIETWCQSIPLTEAFCQF HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHHHH VERADPQFEYEPVSQPLTLREAYEDAKRSGLETELVFP HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure PEVPKVIDVRDRQFVQMELDAAFHAHKSLFRKAFWINKGISADACELKIHQLLMAQTVG CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LLIPRTLISNKPKEIRAFIESTGEHIYKPLTGYLWQEQGSVTQTFTAKVTAELLPENSLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEE AATPGIFQTKVPKKYEARIQFFGRFYGGVRIESHTLSGGDLDWRIGQGGIKACAPAVLPE EECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCHHHHCCCCCCH EIYHKCLNLMERLDIVSGGFDFIIDENDQWIFLEVNEAGQFMFIETWCQSIPLTEAFCQF HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHHHH VERADPQFEYEPVSQPLTLREAYEDAKRSGLETELVFP HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA