Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244805
Identifier: 21244805
GI number: 21244805
Start: 4792345
End: 4793166
Strand: Direct
Name: 21244805
Synonym: XAC4088
Alternate gene names: NA
Gene position: 4792345-4793166 (Clockwise)
Preceding gene: 21244804
Following gene: 21244806
Centisome position: 92.6
GC content: 66.42
Gene sequence:
>822_bases ATGAGCCGGCAACCGCTGAGCCGCGAAGACACCGCCATCCTGGTGCCAGCCTTGAACGAGGCGCTGCGCATCCGCGAAGT GGTCACCGACGCGCTGACCTATTGCTCTCACGTCATCGTGATCGACGACGGCTCCGACGACGGCACCGCCGAGTGCATCG CCGGCATGCCGGTGACGCTGATCCGTCACCCGCAGCGCATGGGCAAGGGCGCGGCACTGCGCAGTGGCTTTGCGCAAGCA CAGCGTCTTGGCATGCGCGCGGTGATGACCATGGACGGCGACGGCCAGCACAAGGCGGCCGATTTCCCGCGCCTGCTGGC CGCCGCCAACCGCCACCCGGGCTGCGTGATCATCGGTGCGCGCATGCGCAAGCGCGCCACCCAGCCCACCATCCGCCGCA TCGGCAACGATTTCGGCGACTGGGGCATTGCCTGGGGGTGCGGCTTCCGCTTGATCGACAGCCAAAGCGGCCAACGGTTG TATCCGGCCTCGGTGTTCACCCTGCCCAACGTGCCCGGCGAGGGCTTCGTGTTCGAAGCGCAGCTGCTGATTTCGGCCGC GCGCCAGGCCGGCGCGCGCGTAGTCGCCGTGCCGATCGAAACCCGCTACGCCGGTACCTCGCCTGGCACCTTCCGCAAGA GCCATTTCCGGCTGGTTCGCGACCTGTGGAATATCACCTCGCACGTGGTCAAACAGGTGTGGGCATACGGCCATGTGTGG CGCGAATATCGCCGCGTGCGCGCCAACCCGGTGATCGTTGACGATCCCGATGGCGAATTTGCTACTGTCCCTGCGGTCAC CAAGAGCAATCACTCCTCATGA
Upstream 100 bases:
>100_bases TGGCGCCGATGCTGCCGCTGCTGGACCTGTTGGCCGGCAATGGCGGCAGCGTGGCGCTGCATGCCGCACCGGGCCGGGTG CTGCGCGTGGAGGTCCGGCA
Downstream 100 bases:
>100_bases ATGCGCAGCGCGCCGATGTCGTGATCACCGGGGGTGGCCTGGCCGGCCTGAGCCTGGCCTTGCAACTGAAGCAGCGCGAT CCGGAGCTTGCCATCACCGT
Product: dolichyl-phosphate mannose synthase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSRQPLSREDTAILVPALNEALRIREVVTDALTYCSHVIVIDDGSDDGTAECIAGMPVTLIRHPQRMGKGAALRSGFAQA QRLGMRAVMTMDGDGQHKAADFPRLLAAANRHPGCVIIGARMRKRATQPTIRRIGNDFGDWGIAWGCGFRLIDSQSGQRL YPASVFTLPNVPGEGFVFEAQLLISAARQAGARVVAVPIETRYAGTSPGTFRKSHFRLVRDLWNITSHVVKQVWAYGHVW REYRRVRANPVIVDDPDGEFATVPAVTKSNHSS
Sequences:
>Translated_273_residues MSRQPLSREDTAILVPALNEALRIREVVTDALTYCSHVIVIDDGSDDGTAECIAGMPVTLIRHPQRMGKGAALRSGFAQA QRLGMRAVMTMDGDGQHKAADFPRLLAAANRHPGCVIIGARMRKRATQPTIRRIGNDFGDWGIAWGCGFRLIDSQSGQRL YPASVFTLPNVPGEGFVFEAQLLISAARQAGARVVAVPIETRYAGTSPGTFRKSHFRLVRDLWNITSHVVKQVWAYGHVW REYRRVRANPVIVDDPDGEFATVPAVTKSNHSS >Mature_272_residues SRQPLSREDTAILVPALNEALRIREVVTDALTYCSHVIVIDDGSDDGTAECIAGMPVTLIRHPQRMGKGAALRSGFAQAQ RLGMRAVMTMDGDGQHKAADFPRLLAAANRHPGCVIIGARMRKRATQPTIRRIGNDFGDWGIAWGCGFRLIDSQSGQRLY PASVFTLPNVPGEGFVFEAQLLISAARQAGARVVAVPIETRYAGTSPGTFRKSHFRLVRDLWNITSHVVKQVWAYGHVWR EYRRVRANPVIVDDPDGEFATVPAVTKSNHSS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325029, Length=246, Percent_Identity=26.0162601626016, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29985; Mature: 29853
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQPLSREDTAILVPALNEALRIREVVTDALTYCSHVIVIDDGSDDGTAECIAGMPVTL CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCHHH IRHPQRMGKGAALRSGFAQAQRLGMRAVMTMDGDGQHKAADFPRLLAAANRHPGCVIIGA HHCHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECC RMRKRATQPTIRRIGNDFGDWGIAWGCGFRLIDSQSGQRLYPASVFTLPNVPGEGFVFEA HHHHHCCCHHHHHHCCCCCCCCEECCCCEEEEECCCCCEECCEEEEECCCCCCCCEEEHH QLLISAARQAGARVVAVPIETRYAGTSPGTFRKSHFRLVRDLWNITSHVVKQVWAYGHVW HHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REYRRVRANPVIVDDPDGEFATVPAVTKSNHSS HHHHHHCCCCEEEECCCCCEEECCCCCCCCCCC >Mature Secondary Structure SRQPLSREDTAILVPALNEALRIREVVTDALTYCSHVIVIDDGSDDGTAECIAGMPVTL CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHCCCCHHH IRHPQRMGKGAALRSGFAQAQRLGMRAVMTMDGDGQHKAADFPRLLAAANRHPGCVIIGA HHCHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECC RMRKRATQPTIRRIGNDFGDWGIAWGCGFRLIDSQSGQRLYPASVFTLPNVPGEGFVFEA HHHHHCCCHHHHHHCCCCCCCCEECCCCEEEEECCCCCEECCEEEEECCCCCCCCEEEHH QLLISAARQAGARVVAVPIETRYAGTSPGTFRKSHFRLVRDLWNITSHVVKQVWAYGHVW HHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REYRRVRANPVIVDDPDGEFATVPAVTKSNHSS HHHHHHCCCCEEEECCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]