Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244358
Identifier: 21244358
GI number: 21244358
Start: 4308372
End: 4309274
Strand: Direct
Name: 21244358
Synonym: XAC3633
Alternate gene names: NA
Gene position: 4308372-4309274 (Clockwise)
Preceding gene: 21244357
Following gene: 21244359
Centisome position: 83.24
GC content: 61.79
Gene sequence:
>903_bases ATGCTCGTCAGGAAGATTTCACTGGTCCTTGCGCTAGCAACGATCGCCGCCTGCACACAGGCGACACCGGACGCCACCGC TCCGAAGACCGCCGCAGCCGCGGCCGGCACCCCTACAAAACCGTCAGAAAAGGATGCATCTCCCATGCAGGACGCAACCC AGGGATCGACCCAGCAACTGCAGCCGCCGCGGACCGACAGCGTGCTGTATTTCATCAGCAACGTGGACGGCGATGGCGCA ACCTCGTACGAGGTCGCCAATGGCAGCTGGATTCATTATTGGTACGGCTTCCAGTTCGAACTCGGTGGTACGCGGTATTA CACCGGCTTCGCCTGGGAAACGCCCGAGCGCTTCGGCGCAGAAGGCGAAGACCACTCTCCTGCGCCCGGCACCAAGGTGA CGTTGGCCCATGCCACTTTCGTGACCAGCGAACCGGGGAGCAAAACGCCGTGGAAGCTGCTTGGCGCAGAGCCCTACATC GGCGAATTCGGCGGCTTGGAACAAGGCAACACCGTCGACACCACGCGTCGACCACAGACCTTTGTCACCGATGACAGCCG GCTGGTGCTGGCCGTGCCGACGTGGAGCCTGCAGTCGGGCGTGCGCATCCTTTCCTACGACGCACTCGTGTTCAACCCGA AAGAAACCGATAACGTCAACGACAAGCATTGGACCTATATCGGCAACATTCCGGCTGGTGAGGACAACAGCGCCAATTGT GGCGAAGATGCGCCCGGGAAGATTGCCTGCGTCAAGAACAGCAGCACGCTGGCGTTCGTGAAGCAGCCCGGCCTGCCCGC GCTGCGGGTAACCGTCTCTGCCGATCCGCCGACGAGCGGGGGTGACGCGACGGTTGAATATCGCTACGATGCGGCCAGCA AATCGTATTTGCCGACCCCTTGA
Upstream 100 bases:
>100_bases GCCGCAACGACGCGCGGTAACCGCCAGGCCCGGTGCAGCGACTGGACACAACGGCGGGCTGGAGTAGACTTTCGCCGCCC TCCGCAATGGATGCACCCCA
Downstream 100 bases:
>100_bases TACAGGACCAAAGGAATTGGTTCGGGCGGCGTACCGCTGCAGCCGCGTGGCTGCAGCACTCAATCAAGGACCTTGAGCGA TGCCGACGAACTATTCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLVRKISLVLALATIAACTQATPDATAPKTAAAAAGTPTKPSEKDASPMQDATQGSTQQLQPPRTDSVLYFISNVDGDGA TSYEVANGSWIHYWYGFQFELGGTRYYTGFAWETPERFGAEGEDHSPAPGTKVTLAHATFVTSEPGSKTPWKLLGAEPYI GEFGGLEQGNTVDTTRRPQTFVTDDSRLVLAVPTWSLQSGVRILSYDALVFNPKETDNVNDKHWTYIGNIPAGEDNSANC GEDAPGKIACVKNSSTLAFVKQPGLPALRVTVSADPPTSGGDATVEYRYDAASKSYLPTP
Sequences:
>Translated_300_residues MLVRKISLVLALATIAACTQATPDATAPKTAAAAAGTPTKPSEKDASPMQDATQGSTQQLQPPRTDSVLYFISNVDGDGA TSYEVANGSWIHYWYGFQFELGGTRYYTGFAWETPERFGAEGEDHSPAPGTKVTLAHATFVTSEPGSKTPWKLLGAEPYI GEFGGLEQGNTVDTTRRPQTFVTDDSRLVLAVPTWSLQSGVRILSYDALVFNPKETDNVNDKHWTYIGNIPAGEDNSANC GEDAPGKIACVKNSSTLAFVKQPGLPALRVTVSADPPTSGGDATVEYRYDAASKSYLPTP >Mature_300_residues MLVRKISLVLALATIAACTQATPDATAPKTAAAAAGTPTKPSEKDASPMQDATQGSTQQLQPPRTDSVLYFISNVDGDGA TSYEVANGSWIHYWYGFQFELGGTRYYTGFAWETPERFGAEGEDHSPAPGTKVTLAHATFVTSEPGSKTPWKLLGAEPYI GEFGGLEQGNTVDTTRRPQTFVTDDSRLVLAVPTWSLQSGVRILSYDALVFNPKETDNVNDKHWTYIGNIPAGEDNSANC GEDAPGKIACVKNSSTLAFVKQPGLPALRVTVSADPPTSGGDATVEYRYDAASKSYLPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32020; Mature: 32020
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRKISLVLALATIAACTQATPDATAPKTAAAAAGTPTKPSEKDASPMQDATQGSTQQL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCHHC QPPRTDSVLYFISNVDGDGATSYEVANGSWIHYWYGFQFELGGTRYYTGFAWETPERFGA CCCCCCEEEEEEEECCCCCCCEEEECCCCEEEEEEEEEEEECCEEEEEEEEECCHHHHCC EGEDHSPAPGTKVTLAHATFVTSEPGSKTPWKLLGAEPYIGEFGGLEQGNTVDTTRRPQT CCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE FVTDDSRLVLAVPTWSLQSGVRILSYDALVFNPKETDNVNDKHWTYIGNIPAGEDNSANC EEECCCEEEEEEECCCHHCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC GEDAPGKIACVKNSSTLAFVKQPGLPALRVTVSADPPTSGGDATVEYRYDAASKSYLPTP CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MLVRKISLVLALATIAACTQATPDATAPKTAAAAAGTPTKPSEKDASPMQDATQGSTQQL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCHHC QPPRTDSVLYFISNVDGDGATSYEVANGSWIHYWYGFQFELGGTRYYTGFAWETPERFGA CCCCCCEEEEEEEECCCCCCCEEEECCCCEEEEEEEEEEEECCEEEEEEEEECCHHHHCC EGEDHSPAPGTKVTLAHATFVTSEPGSKTPWKLLGAEPYIGEFGGLEQGNTVDTTRRPQT CCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE FVTDDSRLVLAVPTWSLQSGVRILSYDALVFNPKETDNVNDKHWTYIGNIPAGEDNSANC EEECCCEEEEEEECCCHHCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC GEDAPGKIACVKNSSTLAFVKQPGLPALRVTVSADPPTSGGDATVEYRYDAASKSYLPTP CCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA