Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fhuE [H]
Identifier: 21244223
GI number: 21244223
Start: 4135593
End: 4137788
Strand: Reverse
Name: fhuE [H]
Synonym: XAC3498
Alternate gene names: 21244223
Gene position: 4137788-4135593 (Counterclockwise)
Preceding gene: 77748721
Following gene: 21244218
Centisome position: 79.95
GC content: 65.85
Gene sequence:
>2196_bases ATGTCCCATCGTATCGTCCCTGCGCGCGCGCTGACGCGTGCGGATATCCGTTCGCCGCAGCTCCCGCTGGCGTACTCCCT GCTTGCGCTTGCGCTGGCCTGCGCATGGCCATTGGCGGCTGCGGCGCAATCGAGCACGCGCGACCCGGTCGATCTGGACC GCCTGCAGATCGAGGCACACCGCGGCGCCGCGACCGAAGGCAGCGACTCCTACACCGCCGATGTGGCGCGCAGTTCGACC AAGCTGGAGCTGTCGCTGCGCGAGACGCCGCAGTCGGTGGTGGTGGTGACCCGCCAGCAGATCGTCGACCGTAACCTGCA ATCGCTGCAGGACGTCACCGACACCGTGGCCGGCTTCAACTCGCCGACCTGGGACACCGAGCGCACCTACATCACTGCGC GCGGCTTCGAAGTGGACTACTACCGCATCGACGGCATTCCCACCGACTACACCGGCGACGTGCAGCAGAACATGGCGATC TACGACCGGGTGGAAATCATCCGCGGCGCCAACGGCCTGACCACCGGCGCGGGCAGTCCGGCCGCGTCGATCGACCTGGT GCGCAAGCATGCCGACAGCGATGTGTTCACCGGTCGGGTCGATCTGTCGGCAGGGCGTTGGGACCGCTATCGCGGCACCG TCGACCTGCAATCGCCCTTGAACGCCGCCGGCAACGTGCGTGGACGGGTGGTTGCCAGTGACGAGGACAAGCAGTCGTTC CGCGATTACTACAGCAAGCAATCGTCGCTGTTCTACGGCATCGTCGATGCGGATTTCAGCGATGCCACCCGCGGCTACAT CGGCGTCAACAAGCAGCGCAACGACGGCCGCGGCACCACCTGGGGCGGCGTGCCGGCGTATTTCAGCGACGGTAGCCGCA CCGATTTTGCGCGATCGGATTCGTTCACGCCGCGCTGGGCGCGCGGCGTGGCCGACACCACCAATGCGTTTGCCGGCCTG ACCCATCGCTTCGACAACGGTGCGCAGCTGCACGTGGAATATTCGCATCAGCGGTTCGAAGCCGATTGGAAGTCGGTGCT GTTCGGCTACTTCGATTACCCGGACCGCGAGACCGGCCTGGGCCTTTCCAACACTTTTGGCGGGCGCTATCCCGCAATCA CTGCGCAAAACAGCCTGGATGCCTACCTCAGCGTGCCGTTGACCTGGTGGGGCCGCAATCACGAACTGGTCGCCGGTGCC ACCTGGATGAACCGCAACGTGCGCAGCTGGTCCAACGGGCCGCAGCCGCCGCAGGTGCTGACGGCCGAAAGCGTCTACGC CTGGACCGGCAGCATGGCGCAGCCGCAATGGACGCCGCTGGTGAAGGGCGAAGAACGCGACGTGCGCCAGGTGGCCGCCT ACGCTGCCGGCCGCTTCAGCCTGACCGACGCGCTCACGGCCATCGTCGGCGCACGCGTCACCGACTGGAAGAACACCGAT CAGCTGGTGCCGGCCAACACCTACGAGCGCCGTGGTCGCACCACGCCGTACGCCGGCCTGATCCTGGACGTGGACGACCA CCATTCGCTCTACGCCAGCTACACCGGCATCTTCAAGCCGCAAAACAATCGCGACCGCAGCGGGCGCTATCTGGCACCGC TGGAAGGCAACAGCTACGAGGTCGGTGCCAAGGGCGAGTACCTCGGCGGCCAGCTCAACGCGGCGCTGGCGTTGTTCCGT ATCGAGCAGGACAACCTGGCGGTCAACGACCCCGGACAACTCGTGCCCGGCACCACCAATCAGGCCTTCCTGGCCGCGAA GGGCACGGTCAGCCAGGGGGTGGAATTCCAGCTCGATGGGCAGCTTTCCGAGCAGTGGCGGATCGCGTTCGGCTTTGCCC AGTTCGATGCCAACGATGCCAGCGGCGTCGACGTCAATCCGACCAGCCCGCGTCGCGAGGCTACCCTGTTCGCCAGTTGG CAGACCGGCCCATGGCGCGTGGGCGGTGGCCTGAGCTGGCAGTCGGCCATCCACGAATTGATGTCCGGGCCACTGGGCAG CACGCAGCGGCTGACTCAGGGCAGCGTGGTGTTGGCCAACGCCATGGCACGCTACGACATCAACCAGGCATGGTCGGCGC AGCTCAACGTGCGCAACCTGTTCGACCGCAAGTACTACGCCAACATCGTCTATCAAAGCCAGTTGATCTACGGCGACCCG CGCGATGTGGAGCTGACGCTGTCCTGGAAGTTCTGA
Upstream 100 bases:
>100_bases CGCCCCCAGCCAGCAAACGGTACGCGCCTTCCGATGGCGCTGCCGACGCCAGCCTCAATAGCCGTCATCGACGGCCATAC TCGCTCTTGAGGCTGACCCC
Downstream 100 bases:
>100_bases ACCTTGCTCCAGACGACAGGCTTTGGCGGCATTCATGCCGCTACCGAGCCTCCACCGACGGACTTACGGCATGTCCCGCT AGCGGTGAGGGCGGCGCGCA
Product: ferric iron uptake outer membrane protein
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MSHRIVPARALTRADIRSPQLPLAYSLLALALACAWPLAAAAQSSTRDPVDLDRLQIEAHRGAATEGSDSYTADVARSST KLELSLRETPQSVVVVTRQQIVDRNLQSLQDVTDTVAGFNSPTWDTERTYITARGFEVDYYRIDGIPTDYTGDVQQNMAI YDRVEIIRGANGLTTGAGSPAASIDLVRKHADSDVFTGRVDLSAGRWDRYRGTVDLQSPLNAAGNVRGRVVASDEDKQSF RDYYSKQSSLFYGIVDADFSDATRGYIGVNKQRNDGRGTTWGGVPAYFSDGSRTDFARSDSFTPRWARGVADTTNAFAGL THRFDNGAQLHVEYSHQRFEADWKSVLFGYFDYPDRETGLGLSNTFGGRYPAITAQNSLDAYLSVPLTWWGRNHELVAGA TWMNRNVRSWSNGPQPPQVLTAESVYAWTGSMAQPQWTPLVKGEERDVRQVAAYAAGRFSLTDALTAIVGARVTDWKNTD QLVPANTYERRGRTTPYAGLILDVDDHHSLYASYTGIFKPQNNRDRSGRYLAPLEGNSYEVGAKGEYLGGQLNAALALFR IEQDNLAVNDPGQLVPGTTNQAFLAAKGTVSQGVEFQLDGQLSEQWRIAFGFAQFDANDASGVDVNPTSPRREATLFASW QTGPWRVGGGLSWQSAIHELMSGPLGSTQRLTQGSVVLANAMARYDINQAWSAQLNVRNLFDRKYYANIVYQSQLIYGDP RDVELTLSWKF
Sequences:
>Translated_731_residues MSHRIVPARALTRADIRSPQLPLAYSLLALALACAWPLAAAAQSSTRDPVDLDRLQIEAHRGAATEGSDSYTADVARSST KLELSLRETPQSVVVVTRQQIVDRNLQSLQDVTDTVAGFNSPTWDTERTYITARGFEVDYYRIDGIPTDYTGDVQQNMAI YDRVEIIRGANGLTTGAGSPAASIDLVRKHADSDVFTGRVDLSAGRWDRYRGTVDLQSPLNAAGNVRGRVVASDEDKQSF RDYYSKQSSLFYGIVDADFSDATRGYIGVNKQRNDGRGTTWGGVPAYFSDGSRTDFARSDSFTPRWARGVADTTNAFAGL THRFDNGAQLHVEYSHQRFEADWKSVLFGYFDYPDRETGLGLSNTFGGRYPAITAQNSLDAYLSVPLTWWGRNHELVAGA TWMNRNVRSWSNGPQPPQVLTAESVYAWTGSMAQPQWTPLVKGEERDVRQVAAYAAGRFSLTDALTAIVGARVTDWKNTD QLVPANTYERRGRTTPYAGLILDVDDHHSLYASYTGIFKPQNNRDRSGRYLAPLEGNSYEVGAKGEYLGGQLNAALALFR IEQDNLAVNDPGQLVPGTTNQAFLAAKGTVSQGVEFQLDGQLSEQWRIAFGFAQFDANDASGVDVNPTSPRREATLFASW QTGPWRVGGGLSWQSAIHELMSGPLGSTQRLTQGSVVLANAMARYDINQAWSAQLNVRNLFDRKYYANIVYQSQLIYGDP RDVELTLSWKF >Mature_730_residues SHRIVPARALTRADIRSPQLPLAYSLLALALACAWPLAAAAQSSTRDPVDLDRLQIEAHRGAATEGSDSYTADVARSSTK LELSLRETPQSVVVVTRQQIVDRNLQSLQDVTDTVAGFNSPTWDTERTYITARGFEVDYYRIDGIPTDYTGDVQQNMAIY DRVEIIRGANGLTTGAGSPAASIDLVRKHADSDVFTGRVDLSAGRWDRYRGTVDLQSPLNAAGNVRGRVVASDEDKQSFR DYYSKQSSLFYGIVDADFSDATRGYIGVNKQRNDGRGTTWGGVPAYFSDGSRTDFARSDSFTPRWARGVADTTNAFAGLT HRFDNGAQLHVEYSHQRFEADWKSVLFGYFDYPDRETGLGLSNTFGGRYPAITAQNSLDAYLSVPLTWWGRNHELVAGAT WMNRNVRSWSNGPQPPQVLTAESVYAWTGSMAQPQWTPLVKGEERDVRQVAAYAAGRFSLTDALTAIVGARVTDWKNTDQ LVPANTYERRGRTTPYAGLILDVDDHHSLYASYTGIFKPQNNRDRSGRYLAPLEGNSYEVGAKGEYLGGQLNAALALFRI EQDNLAVNDPGQLVPGTTNQAFLAAKGTVSQGVEFQLDGQLSEQWRIAFGFAQFDANDASGVDVNPTSPRREATLFASWQ TGPWRVGGGLSWQSAIHELMSGPLGSTQRLTQGSVVLANAMARYDINQAWSAQLNVRNLFDRKYYANIVYQSQLIYGDPR DVELTLSWKF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=732, Percent_Identity=36.7486338797814, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI1787024, Length=211, Percent_Identity=31.2796208530806, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80712; Mature: 80581
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRIVPARALTRADIRSPQLPLAYSLLALALACAWPLAAAAQSSTRDPVDLDRLQIEAH CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC RGAATEGSDSYTADVARSSTKLELSLRETPQSVVVVTRQQIVDRNLQSLQDVTDTVAGFN CCCCCCCCCCEEHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC SPTWDTERTYITARGFEVDYYRIDGIPTDYTGDVQQNMAIYDRVEIIRGANGLTTGAGSP CCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCC AASIDLVRKHADSDVFTGRVDLSAGRWDRYRGTVDLQSPLNAAGNVRGRVVASDEDKQSF CHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEECCCCCCCCCCCCEEEEECCCHHHHH RDYYSKQSSLFYGIVDADFSDATRGYIGVNKQRNDGRGTTWGGVPAYFSDGSRTDFARSD HHHHCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC SFTPRWARGVADTTNAFAGLTHRFDNGAQLHVEYSHQRFEADWKSVLFGYFDYPDRETGL CCCCHHHHCCCHHHHHHHHHHEECCCCCEEEEEECCHHHHHCHHHHHEEECCCCCCCCCC GLSNTFGGRYPAITAQNSLDAYLSVPLTWWGRNHELVAGATWMNRNVRSWSNGPQPPQVL CCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCCEE TAESVYAWTGSMAQPQWTPLVKGEERDVRQVAAYAAGRFSLTDALTAIVGARVTDWKNTD EECEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCC QLVPANTYERRGRTTPYAGLILDVDDHHSLYASYTGIFKPQNNRDRSGRYLAPLEGNSYE CCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEE VGAKGEYLGGQLNAALALFRIEQDNLAVNDPGQLVPGTTNQAFLAAKGTVSQGVEFQLDG ECCCCCCCCCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCHHCCCEEEECC QLSEQWRIAFGFAQFDANDASGVDVNPTSPRREATLFASWQTGPWRVGGGLSWQSAIHEL CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHH MSGPLGSTQRLTQGSVVLANAMARYDINQAWSAQLNVRNLFDRKYYANIVYQSQLIYGDP HCCCCCCCCHHCCCCEEEEHHHHHCCCCCHHCCEEEHHHHHHHHHEEEEEEEEEEEECCC RDVELTLSWKF CCEEEEEEECC >Mature Secondary Structure SHRIVPARALTRADIRSPQLPLAYSLLALALACAWPLAAAAQSSTRDPVDLDRLQIEAH CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC RGAATEGSDSYTADVARSSTKLELSLRETPQSVVVVTRQQIVDRNLQSLQDVTDTVAGFN CCCCCCCCCCEEHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC SPTWDTERTYITARGFEVDYYRIDGIPTDYTGDVQQNMAIYDRVEIIRGANGLTTGAGSP CCCCCCCCEEEEEECEEEEEEEECCCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCCCCCC AASIDLVRKHADSDVFTGRVDLSAGRWDRYRGTVDLQSPLNAAGNVRGRVVASDEDKQSF CHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEECCCCCCCCCCCCEEEEECCCHHHHH RDYYSKQSSLFYGIVDADFSDATRGYIGVNKQRNDGRGTTWGGVPAYFSDGSRTDFARSD HHHHCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC SFTPRWARGVADTTNAFAGLTHRFDNGAQLHVEYSHQRFEADWKSVLFGYFDYPDRETGL CCCCHHHHCCCHHHHHHHHHHEECCCCCEEEEEECCHHHHHCHHHHHEEECCCCCCCCCC GLSNTFGGRYPAITAQNSLDAYLSVPLTWWGRNHELVAGATWMNRNVRSWSNGPQPPQVL CCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCCEE TAESVYAWTGSMAQPQWTPLVKGEERDVRQVAAYAAGRFSLTDALTAIVGARVTDWKNTD EECEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCC QLVPANTYERRGRTTPYAGLILDVDDHHSLYASYTGIFKPQNNRDRSGRYLAPLEGNSYE CCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEE VGAKGEYLGGQLNAALALFRIEQDNLAVNDPGQLVPGTTNQAFLAAKGTVSQGVEFQLDG ECCCCCCCCCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCHHCCCEEEECC QLSEQWRIAFGFAQFDANDASGVDVNPTSPRREATLFASWQTGPWRVGGGLSWQSAIHEL CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHH MSGPLGSTQRLTQGSVVLANAMARYDINQAWSAQLNVRNLFDRKYYANIVYQSQLIYGDP HCCCCCCCCHHCCCCEEEEHHHHHCCCCCHHCCEEEHHHHHHHHHEEEEEEEEEEEECCC RDVELTLSWKF CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]