Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is nonF
Identifier: 21244216
GI number: 21244216
Start: 4128191
End: 4128871
Strand: Reverse
Name: nonF
Synonym: XAC3491
Alternate gene names: NA
Gene position: 4128871-4128191 (Counterclockwise)
Preceding gene: 21244217
Following gene: 21244213
Centisome position: 79.78
GC content: 64.02
Gene sequence:
>681_bases ATGAAAGTCTTGATGGTGCTGACGTCCCACGACCAGCTCGGCGACACCGGCAAGAAAACCGGGTTTTGGCTGGAAGAATT CGCCGCGCCGTATTACGTGTTCAAGGATGCAGGCGCGGACATCACCCTGGTTTCGCCCAAGGGTGGCCAGCCGCCGCTGG ATCCCAAGAGCGACGAGCCCGACGCACAAACCGACGCCACCAAGCGCTTCAAGCAGGATCCCGAGGCGCAACAAGCCCTG GCAAGCACGCACCGTCTGGCCGACGTCAAGGCCGAGGACTTCGATGTGCTGTTCTACCCGGGCGGCCACGGCCCGCTCTG GGATCTGGCCGAAGACGCCGATTCGATCGCGCTGATCGAAGCGTTTGCCGAGGCCGACAAGCCGCACGGTCTTGTGTGCC ACGCACCAGGCGCGCTGCGTCGGGTCAAGGGCAGCGACGGCACGCCGCTGATCAATGGCCGCCGCGTCACCGGCTTCACC AATAGCGAAGAAGAGGGCGTGGGCCTGACCAAGATCGTGCCGTTCCTGGTCGAAGACGTGCTGACCGAACTCGGCGGCAA ATACGAAAAGGGCGCCGATTGGGGCGTGTACGTGGTCACCGACGGCACCCTGGTCACCGGTCAGAACCCGGCGTCTTCGG AGAAAACCGCAGAAACGCTGCTGGCGCTGGCAAAGCGCTGA
Upstream 100 bases:
>100_bases TGAACATGCAGCGGGTACCACGCGCTCTACACGAGGCTGCAACGGGCTGAACTGCACACTGGCCGCCTTGCCCAGTTGGG CCATGACATGAGGCGATGCG
Downstream 100 bases:
>100_bases TCTTTGCAATCGACGGGTCTTGAAAAAGCCCCGTTCCCTTCGGGACTCAAGGCATGGCCCGCGCGCTCCTGGTGCGCGGG CCATGCTGCGCTTGCACTAG
Product: NonF-related protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR
Sequences:
>Translated_226_residues MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR >Mature_226_residues MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=227, Percent_Identity=34.8017621145374, Blast_Score=94, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324967, Length=232, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324975, Length=232, Percent_Identity=28.8793103448276, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323984, Length=232, Percent_Identity=28.448275862069, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24253; Mature: 24253
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC DAQTDATKRFKQDPEAQQALASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIE CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHH AFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFTNSEEEGVGLTKIVPFLVEDV HHHHCCCCCCEEEECCHHHHCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH LTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR HHHHCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC DAQTDATKRFKQDPEAQQALASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIE CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHH AFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFTNSEEEGVGLTKIVPFLVEDV HHHHCCCCCCEEEECCHHHHCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH LTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR HHHHCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA