Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is hisC [H]
Identifier: 21244148
GI number: 21244148
Start: 4030024
End: 4031226
Strand: Reverse
Name: hisC [H]
Synonym: XAC3423
Alternate gene names: 21244148
Gene position: 4031226-4030024 (Counterclockwise)
Preceding gene: 21244149
Following gene: 21244147
Centisome position: 77.89
GC content: 64.75
Gene sequence:
>1203_bases ATGAACACTGCTCTTTCGCGCCGCACGTTTCTACGCGACTCCGCGCTGTTTGCCGGCGCCGCCGGTGCCGCCAGCTTGCC GCTGCTGGCCAGCGCCATCGAACGCTCCACTGCCATTGCGCCCACGCCGGCAACGGCGCTGACACCGGTAATGATCGACT CCAATGAATTTCCGGAGGGACCGTCGGCTGCCGCAGTAAGGGCCATCGCGCAGATCGCACCGCAAGGCGGGAGGTATCTG CGCCAGGTACAGATGGAATTGATGACCACCCTGGCTGCCGAGCTCAAGCTGCCGGTGGATCATCTGATGGCGTACGCCGG GTCCACCGAACCGCTCGACTACACGATGCTGGCATTCACTTCGCCCAGCGCCGCGTTGGTCACTGCCGACCCCACCTACG AATCCGGCTGGCGTGCGGCAACCCGCAATGGCGCGCGCTTGATCAAGGTGCCGCTGCGCAAGGATTTTTCGCACGATGTA CAGGCCATGTGCGCGGCCGATGCCAACGCGGGCGTCATCTACATCTGCAACCCCAACAATCCCACCGGCTCGGTCACCGC ACGCAAGGACTTGGACTACGCATTGGCGCACAAGCCCAAAGGCAGCGTGTTGGTGGTGGATGAGGCGTATATCCACTTCG CGCAAAGCACGCGCAGCATGGTCGACATGGTTGCCGCAGGCGAAGACGTGGTGGTGTTGCGCACGTTTTCCAAACTCTAT GGCATGGCCGGCATCCGCCTGGGCTATGCGGCCGCGCGCCCGGACCTGCTGGCCAAGCTGAAGTTCTACAGCGTCAACAG CTTGCCGGTCACCGCCGCCGCTGCCGGGCTGGCCAGCCTGCGCGATCCTGCACTGGTGCCGCAACGGCGCGCGCGTACCG CCGCTACCCGCACGGATGTGATGGACTTTCTCGCGCGTCAGGGCTATGCGTGCACTGCCTCGGAGAGCAATTGCTTTATG GTCGATGTGAAGCGCCCCGCGGCTGGCTTCAAGGACGATATGGCCACCCATGGCGTGTTCATCGGTCGCAGCTGGCCGGT GTGGCCCACCTGGTCGCGCATTACCGTGGGCACCGACGCGGAGATGGCGCGCTTCAAACACGCGTTCGTGCAGGTGGTTG CCGGTAACCGCGGCCCGCTGCCGGCGCCGGGCGTGGCGACTGCAGCGGCCGATCCGATGGATGCATTTTTCCGTTACGCC TAG
Upstream 100 bases:
>100_bases ATTCCAGATCGCGGCATTGGGTAACCCGCTGTACCGGGTCGAGATCGAAGTTGTTGCCGTGCGTCCCTGAGTCCGCGTCT TCATCCTGCTGGAGTTTGTC
Downstream 100 bases:
>100_bases AGCGTGTTATGCACTTGGAGGTGAGAGTGTTGGCCGCTGACGGCCAACCCTCCGGGAAGCGCCCTGTGGCGCGCCGAGGC AAGGCGCGCAACGCGGTATC
Product: aminotransferase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNTALSRRTFLRDSALFAGAAGAASLPLLASAIERSTAIAPTPATALTPVMIDSNEFPEGPSAAAVRAIAQIAPQGGRYL RQVQMELMTTLAAELKLPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDDMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKHAFVQVVAGNRGPLPAPGVATAAADPMDAFFRYA
Sequences:
>Translated_400_residues MNTALSRRTFLRDSALFAGAAGAASLPLLASAIERSTAIAPTPATALTPVMIDSNEFPEGPSAAAVRAIAQIAPQGGRYL RQVQMELMTTLAAELKLPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDDMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKHAFVQVVAGNRGPLPAPGVATAAADPMDAFFRYA >Mature_400_residues MNTALSRRTFLRDSALFAGAAGAASLPLLASAIERSTAIAPTPATALTPVMIDSNEFPEGPSAAAVRAIAQIAPQGGRYL RQVQMELMTTLAAELKLPVDHLMAYAGSTEPLDYTMLAFTSPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDV QAMCAADANAGVIYICNPNNPTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKLY GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDVMDFLARQGYACTASESNCFM VDVKRPAAGFKDDMATHGVFIGRSWPVWPTWSRITVGTDAEMARFKHAFVQVVAGNRGPLPAPGVATAAADPMDAFFRYA
Specific function: May catalyze the transamination reaction in phenylalanine biosynthesis [H]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=286, Percent_Identity=27.6223776223776, Blast_Score=90, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322075, Length=260, Percent_Identity=28.0769230769231, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.9
Molecular weight: Translated: 42622; Mature: 42622
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTALSRRTFLRDSALFAGAAGAASLPLLASAIERSTAIAPTPATALTPVMIDSNEFPEG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCEEEECCCCCCCC PSAAAVRAIAQIAPQGGRYLRQVQMELMTTLAAELKLPVDHLMAYAGSTEPLDYTMLAFT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEC SPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDVQAMCAADANAGVIYICNPNN CCCCEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCC PTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKLY CCCCEEECCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDV CCCCCEECHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH MDFLARQGYACTASESNCFMVDVKRPAAGFKDDMATHGVFIGRSWPVWPTWSRITVGTDA HHHHHHCCCEEECCCCCEEEEEECCCCCCCCHHHHHCCEEECCCCCCCCCCCEEEECCCH EMARFKHAFVQVVAGNRGPLPAPGVATAAADPMDAFFRYA HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MNTALSRRTFLRDSALFAGAAGAASLPLLASAIERSTAIAPTPATALTPVMIDSNEFPEG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCEEEECCCCCCCC PSAAAVRAIAQIAPQGGRYLRQVQMELMTTLAAELKLPVDHLMAYAGSTEPLDYTMLAFT CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEC SPSAALVTADPTYESGWRAATRNGARLIKVPLRKDFSHDVQAMCAADANAGVIYICNPNN CCCCEEEECCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCC PTGSVTARKDLDYALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKLY CCCCEEECCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHH GMAGIRLGYAAARPDLLAKLKFYSVNSLPVTAAAAGLASLRDPALVPQRRARTAATRTDV CCCCCEECHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH MDFLARQGYACTASESNCFMVDVKRPAAGFKDDMATHGVFIGRSWPVWPTWSRITVGTDA HHHHHHCCCEEECCCCCEEEEEECCCCCCCCHHHHHCCEEECCCCCCCCCCCEEEECCCH EMARFKHAFVQVVAGNRGPLPAPGVATAAADPMDAFFRYA HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; 2-oxoglutarate
Specific reaction: L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA