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The map label for this gene is ygfB [C]

Identifier: 21244131

GI number: 21244131

Start: 4013891

End: 4014433

Strand: Reverse

Name: ygfB [C]

Synonym: XAC3406

Alternate gene names: 21244131

Gene position: 4014433-4013891 (Counterclockwise)

Preceding gene: 21244139

Following gene: 21244130

Centisome position: 77.57

GC content: 68.32

Gene sequence:

>543_bases
ATGGATCTGCCCGACGTAACCGCTGTGCAACACGAAAGCCGCCAGCTCGCGCTGGCGTCCTCTGCAGCGGAGTTGCATGG
CGGGCTGTGCGGGTGGCTCTCCGGCGGCGGCGCCGACAGTGCCGACTGGCTGGCGCGCATTCTGGCCGACAGCGGTCAGG
TGGCACCCAGGCAGGGTGGGGCGCTGGATCAGCTGCGGCAGGCCACCGTGGCGCAACTGGAAGACCGCGATTTCGCCTTC
GAGTTGCTGCTGGTCGAAGACGGCGCCCCGTTGCCGGCGCGCACCGATGCGTTGTTCGACTGGTGCCGCGCCTTTCTGGG
CGGCTTCGGCCTGGCTGCGCAGCAGCGTCCGGCGCTGAGCGAAGAAGGCGAGGAAGCGCTGCAGGATCTGGCGCGTCTGG
CGCAGGCCTCCAGCGACGACTTCGATACGGCCGACGAGGACGACACCGCATTGGCCGAGATCGAAGAATTCGTGCGCGTG
GCGGTGCTGTTGCTGCATGGCGACTGCGTGATGGGGCCGCGCTTTCGCCAGCGTCTGAACTGA

Upstream 100 bases:

>100_bases
CATGCGCAGATCGCGGCCCACGCAGGCCGCCTTGGTACACTGGGAAGTCACATCGCCGGCCGTGCGCCGGCACCTTTCGC
TCTTCAGCCTGGATGACCCA

Downstream 100 bases:

>100_bases
CTGCCGGCATGAAGAAGCTCACCGGGATTGGCGCGGCCGAGTACGCGCGCCGGCGCAAGCAGCTGATGCAAATGGCGGGC
GAGCAGGCGATTCTGATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPRQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSDDFDTADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN

Sequences:

>Translated_180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPRQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSDDFDTADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN
>Mature_180_residues
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPRQGGALDQLRQATVAQLEDRDFAF
ELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALSEEGEEALQDLARLAQASSDDFDTADEDDTALAEIEEFVRV
AVLLLHGDCVMGPRFRQRLN

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

Organism=Escherichia coli, GI87082182, Length=169, Percent_Identity=32.5443786982249, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 19305; Mature: 19305

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPRQGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
ALDQLRQATVAQLEDRDFAFELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALS
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
EEGEEALQDLARLAQASSDDFDTADEDDTALAEIEEFVRVAVLLLHGDCVMGPRFRQRLN
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MDLPDVTAVQHESRQLALASSAAELHGGLCGWLSGGGADSADWLARILADSGQVAPRQGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
ALDQLRQATVAQLEDRDFAFELLLVEDGAPLPARTDALFDWCRAFLGGFGLAAQQRPALS
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
EEGEEALQDLARLAQASSDDFDTADEDDTALAEIEEFVRVAVLLLHGDCVMGPRFRQRLN
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA