Click here to switch to the map view.

The map label for this gene is pilM

Identifier: 21244110

GI number: 21244110

Start: 3989305

End: 3990387

Strand: Reverse

Name: pilM

Synonym: XAC3385

Alternate gene names: NA

Gene position: 3990387-3989305 (Counterclockwise)

Preceding gene: 21244113

Following gene: 21244109

Centisome position: 77.1

GC content: 62.88

Gene sequence:

>1083_bases
GTGCCCGTCGGCAGGGGAGTTACCGTGGGGCTTTTACCCAAGAGTCAGTCGCCACTGATTGGTGTCGACATTAGTTCGAC
TGCCGTGAAGCTCTTGCAGCTATCGCGCAGCGGGAGCCGTTTCCGCGTGGAACATTACGCGGTGGAACCATTGCCGCCGA
ATGCGGTCGTGGAAAAGAACATCGTCGAAGTGGAAGCGGTGGGCGAAGCCATTCGCCGCGCCATCAACCGTTCCGGCAGC
AAGGCCAAGAACGCGGCAGCTGCCGTGGCAGGGTCGGCGGTGATCACCAAGTTGATCCCGATGCCGGCTGATCTGGACGA
TAGCGACCTGGAAGCCCAGGTCGAACTGGAAGCCACCAATTACATTCCGTACCCGATCGAGGAAGTGAATCTCGATTTCG
AGGTGCTGGGCCCGATGCCCAATAGCCCGGACATGGTGCAGGTGCTGCTGGCCGCCTCGCGTTCGGAGAATGTGGAACTG
CGCCAGTCGGCGCTGGAACTCGGCGGCCTGACCGCCAAGGTAATGGACGTGGAGGCCTTTGCGGTCGAAAACGCCTTCGC
CCTGGTTGCCAGCGAATTGCCGGTAGCCGCCGATGCGGTGGTGGCGCTGGTGGATATCGGCGCGACCATGACCACGCTGA
GCGTGCTGCGCTCCGGTCGCAGTCTGTATAGCCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACTGACGAAGTGATGCGC
CGTTACGGGCTGACCTATGAAGAGGCTGGCCTTGCCAAGCGTCAGGGCGGCCTGCCGGAAAGCTACGAGGTCGAAGTGCT
GGAGCCGTTCAAGGAAGCCACGGTGCAGCAGATCAGCCGTCTGCTGCAGTTCTTCTATGCGGGCAGTGAGTTCAATCGCG
TCGACTGCATCGTGCTGGCCGGCGGTTGCGCCGCGCTGGCGCGCCTGCCGGAGATGGTCGAAGAGCAGCTCGGTGTGACC
ACGGTCGTTGCAAATCCGCTTGCCCAGATGACGCTTGGCCCGAAGGTTCAGGCCCATGCGCTGGCGCTGGATGCGCCTGC
ACTGATGATCGCCACCGGCCTGGCCCTGAGGAGCTTCGACTGA

Upstream 100 bases:

>100_bases
GACGGCACTGGGGTAGCGTCGCCGGGTCATTGCCTGGCGCGTGAAGGGCTTGTCAACTGTTAAAATTTGATTATTAATAC
GAGGGCGCACATGCGTCCAA

Downstream 100 bases:

>100_bases
TGGCAAGAATCAATCTATTGCCCTGGCGCGCGGAGCGCCGAAAGGCGCGCGAGCGCGAGTTCTACTCGATGCTGGGCTTC
GCCGCATTGGGCGGCGTGCT

Product: fimbrial assembly membrane protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Fimbrial Assembly Protein PilM; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pili Biogenesis Protein PilM; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Protein FtsA; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPVGRGVTVGLLPKSQSPLIGVDISSTAVKLLQLSRSGSRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGS
KAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVEL
RQSALELGGLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMR
RYGLTYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVT
TVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD

Sequences:

>Translated_360_residues
MPVGRGVTVGLLPKSQSPLIGVDISSTAVKLLQLSRSGSRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGS
KAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVEL
RQSALELGGLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMR
RYGLTYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVT
TVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD
>Mature_359_residues
PVGRGVTVGLLPKSQSPLIGVDISSTAVKLLQLSRSGSRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAINRSGSK
AKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATNYIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELR
QSALELGGLTAKVMDVEAFAVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMRR
YGLTYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLAGGCAALARLPEMVEEQLGVTT
VVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38346; Mature: 38214

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGRGVTVGLLPKSQSPLIGVDISSTAVKLLQLSRSGSRFRVEHYAVEPLPPNAVVEKN
CCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCC
IVEVEAVGEAIRRAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
YIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLTAKVMDVEAF
CCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHH
AVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMR
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH
RYGLTYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLA
HHCCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GGCAALARLPEMVEEQLGVTTVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD
CCHHHHHHHHHHHHHHCCEEEEHHCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVGRGVTVGLLPKSQSPLIGVDISSTAVKLLQLSRSGSRFRVEHYAVEPLPPNAVVEKN
CCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCC
IVEVEAVGEAIRRAINRSGSKAKNAAAAVAGSAVITKLIPMPADLDDSDLEAQVELEATN
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
YIPYPIEEVNLDFEVLGPMPNSPDMVQVLLAASRSENVELRQSALELGGLTAKVMDVEAF
CCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHHH
AVENAFALVASELPVAADAVVALVDIGATMTTLSVLRSGRSLYSREQVFGGKQLTDEVMR
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH
RYGLTYEEAGLAKRQGGLPESYEVEVLEPFKEATVQQISRLLQFFYAGSEFNRVDCIVLA
HHCCCHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GGCAALARLPEMVEEQLGVTTVVANPLAQMTLGPKVQAHALALDAPALMIATGLALRSFD
CCHHHHHHHHHHHHHHCCEEEEHHCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA