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The map label for this gene is pilO

Identifier: 21244108

GI number: 21244108

Start: 3987861

End: 3988526

Strand: Reverse

Name: pilO

Synonym: XAC3383

Alternate gene names: NA

Gene position: 3988526-3987861 (Counterclockwise)

Preceding gene: 21244109

Following gene: 21244107

Centisome position: 77.06

GC content: 59.46

Gene sequence:

>666_bases
ATGAGTAAGAAATCATTCAAGCTCAGCGATCTGGATTTCAACAATATCGGCGGTTGGCCGCAGCAAGCACGCATTGTGTT
CTGCGTGGTGGTCGGCTTGTTCATCATGGTGCTGGCCTGGTTCCTGTTGATCAGCAGCAAGCGCGAAGAACTGGAAGGCC
TGGAAAGCACCGAATCGCAGCTGCGCACCGAGTTCGAGACCCAACAGGGCCGCGCGGTGAACCTGGAGCCGCTTAAGCAG
CAGCTCGCGCAGATGGAACAGGTGCTGCAGCAGATGCTGCGTCAGCTGCCCAGCAAGACCGAAATGCCGGATCTGATCAT
CGACATCTCGCAGACCGCGTTGTCCAGCGGCTTGTCCAACGAGCTGTTCCAGCCCGGTCCGGAATCGCCGAAGGAGTTCT
ACGCCGAAAAGCCAATCGCTCTGCGCATGGTGGGTAGCTACCACCAGTTCGGTGCCTTCGTCAGCGGTGTGGCCTCGCTG
CCGCGCGTGGTGATCCTGACCATGCACGACATCAACCTCAAGCCCAAGGATCCCAAGGCCGGCATTGGCCCGCGCGGTGC
GCTTGAGCTGTCCGGGACGGTCAAGACCTATCGTTATCTGGACGATGAGGAAATGGCCGAACAGGAAAAGGCTGCGGCCA
ACGCTGCGAAGAAGGGCGGCCAATGA

Upstream 100 bases:

>100_bases
CGGCAGCGGCGCCCGCGCCGGCAACGCCGCCGGCCGCTGCTCCTGCACCGACGCAGGCAGCACCGGCGCCAGCCAATCGG
CCGCAGGAGGGGGCGGCGTC

Downstream 100 bases:

>100_bases
CCATGAAATTGCTCAAGATCCTGTCCTGTGCGGCGTTAATTGCAGTATTGCCGGCGTGCACGCGCGGTGTGACCAGCACA
CCGGGCGATGCGCCGAATCT

Product: fimbrial assembly membrane protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Type IV Fimbrial Biogenesis Protein PilO; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pilus Iv Assembly Membrane Protein Pilo; Type IV Pilus Assembly Protein PilO; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSKKSFKLSDLDFNNIGGWPQQARIVFCVVVGLFIMVLAWFLLISSKREELEGLESTESQLRTEFETQQGRAVNLEPLKQ
QLAQMEQVLQQMLRQLPSKTEMPDLIIDISQTALSSGLSNELFQPGPESPKEFYAEKPIALRMVGSYHQFGAFVSGVASL
PRVVILTMHDINLKPKDPKAGIGPRGALELSGTVKTYRYLDDEEMAEQEKAAANAAKKGGQ

Sequences:

>Translated_221_residues
MSKKSFKLSDLDFNNIGGWPQQARIVFCVVVGLFIMVLAWFLLISSKREELEGLESTESQLRTEFETQQGRAVNLEPLKQ
QLAQMEQVLQQMLRQLPSKTEMPDLIIDISQTALSSGLSNELFQPGPESPKEFYAEKPIALRMVGSYHQFGAFVSGVASL
PRVVILTMHDINLKPKDPKAGIGPRGALELSGTVKTYRYLDDEEMAEQEKAAANAAKKGGQ
>Mature_220_residues
SKKSFKLSDLDFNNIGGWPQQARIVFCVVVGLFIMVLAWFLLISSKREELEGLESTESQLRTEFETQQGRAVNLEPLKQQ
LAQMEQVLQQMLRQLPSKTEMPDLIIDISQTALSSGLSNELFQPGPESPKEFYAEKPIALRMVGSYHQFGAFVSGVASLP
RVVILTMHDINLKPKDPKAGIGPRGALELSGTVKTYRYLDDEEMAEQEKAAANAAKKGGQ

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24559; Mature: 24427

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKSFKLSDLDFNNIGGWPQQARIVFCVVVGLFIMVLAWFLLISSKREELEGLESTESQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRTEFETQQGRAVNLEPLKQQLAQMEQVLQQMLRQLPSKTEMPDLIIDISQTALSSGLSN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
ELFQPGPESPKEFYAEKPIALRMVGSYHQFGAFVSGVASLPRVVILTMHDINLKPKDPKA
HHCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
GIGPRGALELSGTVKTYRYLDDEEMAEQEKAAANAAKKGGQ
CCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKKSFKLSDLDFNNIGGWPQQARIVFCVVVGLFIMVLAWFLLISSKREELEGLESTESQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LRTEFETQQGRAVNLEPLKQQLAQMEQVLQQMLRQLPSKTEMPDLIIDISQTALSSGLSN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
ELFQPGPESPKEFYAEKPIALRMVGSYHQFGAFVSGVASLPRVVILTMHDINLKPKDPKA
HHCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
GIGPRGALELSGTVKTYRYLDDEEMAEQEKAAANAAKKGGQ
CCCCCCCEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA