Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is pilP
Identifier: 21244107
GI number: 21244107
Start: 3987331
End: 3987864
Strand: Reverse
Name: pilP
Synonym: XAC3382
Alternate gene names: NA
Gene position: 3987864-3987331 (Counterclockwise)
Preceding gene: 21244108
Following gene: 21244106
Centisome position: 77.05
GC content: 63.67
Gene sequence:
>534_bases ATGACCATGAAATTGCTCAAGATCCTGTCCTGTGCGGCGTTAATTGCAGTATTGCCGGCGTGCACGCGCGGTGTGACCAG CACACCGGGCGATGCGCCGAATCTGGAAGCCTGGGTTGCCGAGGTGCGCGCGCGTCCTGCGCCGCCGCTGGAGCCGTTGC CGGTGATGCAGCAATTCGAGACCTTCGAATATGCAGCGCAGGCGATGCGCGACCCGTTCAGCGATGCCTGGGTCAGCGCG GAAGGTGGCAACGGCACGCGTCCGGATCCGAACCGGCGTAAGGAGCCGTTGGAAGCCTTTCCGCTCGACGCCCTCGACAT GGTGGGGACCATTGGCGGCGGTTCGGGCCTGATCGCTCTGGTGATGGCGCCTGACAAGGTGACCTACCGGGTGCGGCCTG GTGTGTATCTGGGACAGAGCGATGGCCGGGTGACCGGGGTCTACGAAGACCGCATCGAGCTGATTGAACTTGTGCCGGAC GGTGCGGGTGGATGGCTTGAACGGCCGGCCGCACTCGCATTGGATGATCAATAA
Upstream 100 bases:
>100_bases TTGAGCTGTCCGGGACGGTCAAGACCTATCGTTATCTGGACGATGAGGAAATGGCCGAACAGGAAAAGGCTGCGGCCAAC GCTGCGAAGAAGGGCGGCCA
Downstream 100 bases:
>100_bases AGTGATAGGGGATAGCACGATGACGTTTTCCAATGCCCAGCGGCTGCGTCCGGTACGACGCCACGCGATCTTCCAGGCCT GCGCGTTGGGGTTCGCGCTG
Product: fimbrial assembly protein
Products: NA
Alternate protein names: Pilus Assembly Protein PilQ; Type 4 Fimbrial Biogenesis Protein PilP; Type IV Pilus Biogenesis Protein PilP; Type IV Pilus Assembly Protein PilP; Fimbrial Assembly Protein; Lipoprotein; Tfp Pilus Assembly Protein PilP; Fimbrial Assembly Protein PilP; Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilp; Type IV Pilus Assembly; Pilus Assembly Protein Pilp; Fimbriae Biogenesis-Related Fusion Protein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTMKLLKILSCAALIAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSA EGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPD GAGGWLERPAALALDDQ
Sequences:
>Translated_177_residues MTMKLLKILSCAALIAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSA EGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPD GAGGWLERPAALALDDQ >Mature_176_residues TMKLLKILSCAALIAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSAE GGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDG AGGWLERPAALALDDQ
Specific function: Unknown
COG id: COG3168
COG function: function code NU; Tfp pilus assembly protein PilP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18946; Mature: 18815
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKLLKILSCAALIAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH TFEYAAQAMRDPFSDAWVSAEGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIAL HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCEEEE VMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDGAGGWLERPAALALDDQ EECCCCEEEEECCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure TMKLLKILSCAALIAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH TFEYAAQAMRDPFSDAWVSAEGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIAL HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCEEEE VMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDGAGGWLERPAALALDDQ EECCCCEEEEECCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA