Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244099
Identifier: 21244099
GI number: 21244099
Start: 3977401
End: 3979149
Strand: Reverse
Name: 21244099
Synonym: XAC3374
Alternate gene names: NA
Gene position: 3979149-3977401 (Counterclockwise)
Preceding gene: 21244100
Following gene: 21244098
Centisome position: 76.88
GC content: 68.5
Gene sequence:
>1749_bases ATGATCGGCAGACAGCACTTACGTCGCGCGGCAATCGGCATGCTGGCCAGCGTGGCACTGTTGGCGTGCGCGCCGGTGGG TGCAGTCACGCGCGCGTGGCTGGACCGCGACAGCGTCAATGCCGGCGATGTGGCGATGTTGAATATCGAAACCGACCAAC GCGGCGTCGACCCGGATTACACGCCACTGCGCACCGACTTCTTGCTGGGCGCCAAGAGCGCCAATCAGCAGATGCAGGTG GCCAATGGTTCGGTGACGGTGCGTGCCTTGTTCGGTGTGGTGCTGACGCCGCGCAAGAGCGGCGAACTGATCGTGCCGGC GATACGCGTGGGCAATGAACGCACCGAACCGCTGCGCCTGCAGGTGGTTGGGGCGGCGAACGATCCCGCAAGCAGCTCCG GCAACGCTGCCGGCGTGCCGAGTGCAGCGCAGGGCAATGAAGAAGCCTTCGTCCAAACCCAGGTGGACGACCCGCAACCC TACGTGCAGCAAAGCGTGGGCGTGGTGGTGCGGTTGTACTTCGCCACCCAGCTGGCATCGGGCGAGTTGGATCTTGAGGC CCCGGATGGGGCATCGATGCAGCGCGTCGGCGACGACGTCAGCTCGGTCAAGGTCGTCAACGGACGCCAATACAACGTGG TGGAGCGGCGCTACCTGCTGGTCCCCGAGCGCAGCGGTCGCCTGCTGCTGCCGCCGGCACGTTTCAACGGGCGTTCGGTG GGCGGGTTTTTCGACGACTACTTCGGGCGCGGAAACGGTGAGCTGAGTGCGCGCAGTGCGAGCATTCCGTTGCAGGTGCG CGCGCAGCCGGCCAATGCGCCGCAGCCGTGGTTGCCGTTGCGCAGCCTGCAGTTGCGCTACACGACCACGCCACAGCGGG CGACCGCCGGTGAGGCGGCCCAATTCGTGGTGGAAGCCAGTGCGCGCGGTGCGACCCAGGCGCAGTTTCCCGAATTGCCG ACGCCCAGCGTGCCCGACGCGCAGGTGTTCGCCGAGCCGCCGCAATTCGAGGAGCGCTTCGTGGACGGCTCGCCGCAACT GCGACTGACCCGGCGCTATTCGATCGTGCCCAACCGCGCCGGTCCGTTGGTGGTGCCTGGGCTGCAGATGGCGTGGTGGG ATGTGGGGCCAGGGGCAGCCAAGACGGCTTCACTGCCCGATCTGACGCTCGATGTCGCGGCAGGTAGCGGCGCGTTTGCG ACACCTGCGCCGGCACCCACGCCGCATCCGACACCCGATCAATCGGCGTCGACACCCGATCGCACGCTCACCCTGCAAGC ACCATCGCCCGCGCAACCGCCGTGGGGGTGGATCGCGGCGGCGATCGGATTTGCGCTTTTGTGGATCGCCACGCTGGTGT GGGCGTTAGTGCGTCGGCGCGGTGCTCAGCGCGGTGCATCAGGCGGCACTGGTGGTGACGGCAGCAATGGACCAGCTGAG GTTGGGCGCGCGACCCACGGCGTGGCCGAGTTGCGCCGCGCGCTCGACACCGGCGGCATGGACGATGTGGCGGCGGTGCT CTGCGGCATGGCTGGCGTTGCCGATATCGACGCAGTGGTGGCGGCGTTGGCAGACCCGGCGCAGCAGGCAGCGGTGGCGC GCATGCAGCGCGCACGCTGGGGCGGCGATGGCGATGTGACCGGCGCGCGCGCCGCCTTGCGCGAGGCATTCGCCAAGGGG CCACGGTGGCACCATGCAAGCGCAGCCGAACCGGAGGTGCTGGCGCCGTTGTATCCGCCTGCGCCTTGA
Upstream 100 bases:
>100_bases AGGCGGTGGACGCATGGCTGCGGCGGGTGCCGGACGATCCGGGCAGCCTGCTGCGTACCAAATTCAGGCTGGAATACGAA CGCAGGCAACGGGACGGACG
Downstream 100 bases:
>100_bases TCGACGGCGTTGCATTGGTGGCGGCTTGGAACGACTGAGATACTGGCTGCGCAGTTTCCGCGCGGTTGCAGTCGGTGCGA GGATGGTCTGCAACAACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MIGRQHLRRAAIGMLASVALLACAPVGAVTRAWLDRDSVNAGDVAMLNIETDQRGVDPDYTPLRTDFLLGAKSANQQMQV ANGSVTVRALFGVVLTPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPASSSGNAAGVPSAAQGNEEAFVQTQVDDPQP YVQQSVGVVVRLYFATQLASGELDLEAPDGASMQRVGDDVSSVKVVNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQFVVEASARGATQAQFPELP TPSVPDAQVFAEPPQFEERFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQMAWWDVGPGAAKTASLPDLTLDVAAGSGAFA TPAPAPTPHPTPDQSASTPDRTLTLQAPSPAQPPWGWIAAAIGFALLWIATLVWALVRRRGAQRGASGGTGGDGSNGPAE VGRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVVAALADPAQQAAVARMQRARWGGDGDVTGARAALREAFAKG PRWHHASAAEPEVLAPLYPPAP
Sequences:
>Translated_582_residues MIGRQHLRRAAIGMLASVALLACAPVGAVTRAWLDRDSVNAGDVAMLNIETDQRGVDPDYTPLRTDFLLGAKSANQQMQV ANGSVTVRALFGVVLTPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPASSSGNAAGVPSAAQGNEEAFVQTQVDDPQP YVQQSVGVVVRLYFATQLASGELDLEAPDGASMQRVGDDVSSVKVVNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQFVVEASARGATQAQFPELP TPSVPDAQVFAEPPQFEERFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQMAWWDVGPGAAKTASLPDLTLDVAAGSGAFA TPAPAPTPHPTPDQSASTPDRTLTLQAPSPAQPPWGWIAAAIGFALLWIATLVWALVRRRGAQRGASGGTGGDGSNGPAE VGRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVVAALADPAQQAAVARMQRARWGGDGDVTGARAALREAFAKG PRWHHASAAEPEVLAPLYPPAP >Mature_582_residues MIGRQHLRRAAIGMLASVALLACAPVGAVTRAWLDRDSVNAGDVAMLNIETDQRGVDPDYTPLRTDFLLGAKSANQQMQV ANGSVTVRALFGVVLTPRKSGELIVPAIRVGNERTEPLRLQVVGAANDPASSSGNAAGVPSAAQGNEEAFVQTQVDDPQP YVQQSVGVVVRLYFATQLASGELDLEAPDGASMQRVGDDVSSVKVVNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAAQFVVEASARGATQAQFPELP TPSVPDAQVFAEPPQFEERFVDGSPQLRLTRRYSIVPNRAGPLVVPGLQMAWWDVGPGAAKTASLPDLTLDVAAGSGAFA TPAPAPTPHPTPDQSASTPDRTLTLQAPSPAQPPWGWIAAAIGFALLWIATLVWALVRRRGAQRGASGGTGGDGSNGPAE VGRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVVAALADPAQQAAVARMQRARWGGDGDVTGARAALREAFAKG PRWHHASAAEPEVLAPLYPPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61111; Mature: 61111
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRQHLRRAAIGMLASVALLACAPVGAVTRAWLDRDSVNAGDVAMLNIETDQRGVDPDY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC TPLRTDFLLGAKSANQQMQVANGSVTVRALFGVVLTPRKSGELIVPAIRVGNERTEPLRL CCCCHHHEEECCCCCCEEEECCCCEEEEEEECHHCCCCCCCCEEEEEEECCCCCCCCEEE QVVGAANDPASSSGNAAGVPSAAQGNEEAFVQTQVDDPQPYVQQSVGVVVRLYFATQLAS EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC GELDLEAPDGASMQRVGDDVSSVKVVNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV CCEEEECCCCCCHHHHCCCHHHEEEECCCEEEEEEEEEEEEECCCCCEEECCCCCCCCCC GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAA CCHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH QFVVEASARGATQAQFPELPTPSVPDAQVFAEPPQFEERFVDGSPQLRLTRRYSIVPNRA HHHEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCEEEEEEEEECCCCC GPLVVPGLQMAWWDVGPGAAKTASLPDLTLDVAAGSGAFATPAPAPTPHPTPDQSASTPD CCEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC RTLTLQAPSPAQPPWGWIAAAIGFALLWIATLVWALVRRRGAQRGASGGTGGDGSNGPAE CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VGRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVVAALADPAQQAAVARMQRARW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHC GGDGDVTGARAALREAFAKGPRWHHASAAEPEVLAPLYPPAP CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MIGRQHLRRAAIGMLASVALLACAPVGAVTRAWLDRDSVNAGDVAMLNIETDQRGVDPDY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC TPLRTDFLLGAKSANQQMQVANGSVTVRALFGVVLTPRKSGELIVPAIRVGNERTEPLRL CCCCHHHEEECCCCCCEEEECCCCEEEEEEECHHCCCCCCCCEEEEEEECCCCCCCCEEE QVVGAANDPASSSGNAAGVPSAAQGNEEAFVQTQVDDPQPYVQQSVGVVVRLYFATQLAS EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC GELDLEAPDGASMQRVGDDVSSVKVVNGRQYNVVERRYLLVPERSGRLLLPPARFNGRSV CCEEEECCCCCCHHHHCCCHHHEEEECCCEEEEEEEEEEEEECCCCCEEECCCCCCCCCC GGFFDDYFGRGNGELSARSASIPLQVRAQPANAPQPWLPLRSLQLRYTTTPQRATAGEAA CCHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH QFVVEASARGATQAQFPELPTPSVPDAQVFAEPPQFEERFVDGSPQLRLTRRYSIVPNRA HHHEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCEEEEEEEEECCCCC GPLVVPGLQMAWWDVGPGAAKTASLPDLTLDVAAGSGAFATPAPAPTPHPTPDQSASTPD CCEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC RTLTLQAPSPAQPPWGWIAAAIGFALLWIATLVWALVRRRGAQRGASGGTGGDGSNGPAE CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VGRATHGVAELRRALDTGGMDDVAAVLCGMAGVADIDAVVAALADPAQQAAVARMQRARW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHC GGDGDVTGARAALREAFAKGPRWHHASAAEPEVLAPLYPPAP CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA