Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21243845
Identifier: 21243845
GI number: 21243845
Start: 3665059
End: 3665580
Strand: Direct
Name: 21243845
Synonym: XAC3118
Alternate gene names: NA
Gene position: 3665059-3665580 (Clockwise)
Preceding gene: 21243844
Following gene: 21243846
Centisome position: 70.81
GC content: 62.07
Gene sequence:
>522_bases ATGGCTTCCATGTCGCTCGCGCGCCGCATTCCCTTGCTGGTTTGCCTGACCTTGGCGTTGCATGCCGCCCCCGCCCTGGC GCAACGCGCGGTGCAAGGCGACCTGCAGTCGCAGATGAGTGCCGAACAGTTCAAGGCCGCCGGCCTGGACAAGCTCAATG CCAGCGAACTGGCTGCGCTCAACGATTGGCTACAGGGCAAGGTCGCCAAAGAGGCCGCAGTGGTGGTCGAACAGGCCAAG GAAGCCGGCCGTCAGGAAGTGATCGTCAAGAACCGCGGCTTCTTCGACTTCGGCAGCAAGGAGCCGATCGAGAGCACGAT GCTCGGCGAATTCAAGGGCTTTTCGAAGGGCCGCGTCTACACGCTGGCGAATGGTCAGGAGTGGGAACAAACCGATACGG CCAGCCTGTCCGCGGTGCGCAAGGATGCACCCAAGGTCAAGATCAAGCCGGGTCTGGTCGGCGTGTGGTATCTGCAGATC GAGGGTTACAACACCCCTGCAAAGGTGCGGCGGATCAAGTAG
Upstream 100 bases:
>100_bases GCCGCCCCGAACGCCTAGCACCAGCCGCTGCGGACATGCTGGAATAGGCAGCGCCGGCGTGCGTCAACAGCGTCTACACT AGCCCCCTCTTCTTCTTCGG
Downstream 100 bases:
>100_bases CGCATCCGCCACGCTTTCGCGGCTGCCGAAGACGGTCGCCGCGCTTGGCATCGGCAGGCGCCACGCGAATCCCGCCACTG GGCGTTGCGCATGCAAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MASMSLARRIPLLVCLTLALHAAPALAQRAVQGDLQSQMSAEQFKAAGLDKLNASELAALNDWLQGKVAKEAAVVVEQAK EAGRQEVIVKNRGFFDFGSKEPIESTMLGEFKGFSKGRVYTLANGQEWEQTDTASLSAVRKDAPKVKIKPGLVGVWYLQI EGYNTPAKVRRIK
Sequences:
>Translated_173_residues MASMSLARRIPLLVCLTLALHAAPALAQRAVQGDLQSQMSAEQFKAAGLDKLNASELAALNDWLQGKVAKEAAVVVEQAK EAGRQEVIVKNRGFFDFGSKEPIESTMLGEFKGFSKGRVYTLANGQEWEQTDTASLSAVRKDAPKVKIKPGLVGVWYLQI EGYNTPAKVRRIK >Mature_172_residues ASMSLARRIPLLVCLTLALHAAPALAQRAVQGDLQSQMSAEQFKAAGLDKLNASELAALNDWLQGKVAKEAAVVVEQAKE AGRQEVIVKNRGFFDFGSKEPIESTMLGEFKGFSKGRVYTLANGQEWEQTDTASLSAVRKDAPKVKIKPGLVGVWYLQIE GYNTPAKVRRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18874; Mature: 18743
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMSLARRIPLLVCLTLALHAAPALAQRAVQGDLQSQMSAEQFKAAGLDKLNASELAAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NDWLQGKVAKEAAVVVEQAKEAGRQEVIVKNRGFFDFGSKEPIESTMLGEFKGFSKGRVY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEE TLANGQEWEQTDTASLSAVRKDAPKVKIKPGLVGVWYLQIEGYNTPAKVRRIK EECCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCCHHHHEECC >Mature Secondary Structure ASMSLARRIPLLVCLTLALHAAPALAQRAVQGDLQSQMSAEQFKAAGLDKLNASELAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH NDWLQGKVAKEAAVVVEQAKEAGRQEVIVKNRGFFDFGSKEPIESTMLGEFKGFSKGRVY HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEE TLANGQEWEQTDTASLSAVRKDAPKVKIKPGLVGVWYLQIEGYNTPAKVRRIK EECCCCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEEECCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA