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The map label for this gene is pqqE [H]

Identifier: 21243844

GI number: 21243844

Start: 3663887

End: 3665005

Strand: Direct

Name: pqqE [H]

Synonym: XAC3117

Alternate gene names: 21243844

Gene position: 3663887-3665005 (Clockwise)

Preceding gene: 21243843

Following gene: 21243845

Centisome position: 70.79

GC content: 68.36

Gene sequence:

>1119_bases
ATGAGCATCGCGCCGCCACCGCTGTCGGTGTTGTTGGAGCTGACCCACCGCTGCCCGTTGGCGTGCCCGTATTGCTCCAA
CCCGATCGCGCTGGCCGCGCTGCGCGAGGAAATGGACACCGCAGGCTGGCGCTCGCTGTTGCAGCAGGCCGCCGACATGG
GCGTGCTGCAGGCGCATTTCTCCGGCGGTGAACCGATGCTGCGCAAAGACCTGCCCGAACTGGTCGCACATGCGCGCGCG
CTCGGGCTGTACAGCAACCTGATCACCTCCGGCGTCGCTGGCGGCGAGCCGATGCTGGACCAACTGCAGGCGGCCGGGCT
GGAACATGTGCAGCTGAGCGTGCAGGACGTCGACCCGGCCGGCGCCGACCGTATCGCCGGCTACCGCAATAGCTTGTCCA
GGAAGCGCGAATTCGCCGCTGCGGTCCGCGCACGCGGCCTACCGCTGACGATCAACGCGGTACTGCACCGCCATAACGCC
GAGCGCGTGCCCGGCATGATCGCGCTGGCGCTGGAGTGGCAGGCCGAGCGCATCGAAGTAGCGCACACCCAATACTACGG
CTGGGGCCTGCGCAACCGCGCTGCGCTGATGCCCAGCCGCGAGCAACTGCTGGCCACCATCGACGCGGTGGAAACCGCAC
GTCGCCAGCTCGGCGACCGCCTGGCGATCGATTTCGTCACGCCCGATTACTACGCGCGCCAGCCCAAACCCTGCATGGGT
GGCTGGGGCCAGCGTTTCGTCAATATTTCTCCGCGCGGCGATGTGCTGCCCTGCCATGCCGCCGAGACCATCGAGGGCAT
GCGCTTTGATAATCTGCGCGAGCGCTCGCTGGCCGACATCTGGAACAACGGCGAGGCGTTCGTGCGCTTTCGCGGCACCG
CATGGATGCCGGAGGTGTGCCAGGGCTGCCCCAAGCGCGAGATCGATTGGGGTGGCTGCCGCTGTCAGGCACTGGCGCTC
AGCGGCGATGCCGCCACGCTGGACCCGGTCTGCGAGCGTTCGCCCATCCATGCGCAGGTGCGCGCAGCCGCCGAGCAGGA
GTCGGCATCGCCGGCACCGGCCTTCGTCTACCGCCGCCCCGAACGCCTAGCACCAGCCGCTGCGGACATGCTGGAATAG

Upstream 100 bases:

>100_bases
CGCAGGAGCTGGCCGCAGAATTCGATGCGGACGCAGCGCAAATCGAAGCGGACGTGATCGAACTCACCGATACCCTGCAT
CAGAAACGTTTGCTGCGGCT

Downstream 100 bases:

>100_bases
GCAGCGCCGGCGTGCGTCAACAGCGTCTACACTAGCCCCCTCTTCTTCTTCGGATGGCTTCCATGTCGCTCGCGCGCCGC
ATTCCCTTGCTGGTTTGCCT

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSIAPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLQQAADMGVLQAHFSGGEPMLRKDLPELVAHARA
LGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADRIAGYRNSLSRKREFAAAVRARGLPLTINAVLHRHNA
ERVPGMIALALEWQAERIEVAHTQYYGWGLRNRAALMPSREQLLATIDAVETARRQLGDRLAIDFVTPDYYARQPKPCMG
GWGQRFVNISPRGDVLPCHAAETIEGMRFDNLRERSLADIWNNGEAFVRFRGTAWMPEVCQGCPKREIDWGGCRCQALAL
SGDAATLDPVCERSPIHAQVRAAAEQESASPAPAFVYRRPERLAPAAADMLE

Sequences:

>Translated_372_residues
MSIAPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLQQAADMGVLQAHFSGGEPMLRKDLPELVAHARA
LGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADRIAGYRNSLSRKREFAAAVRARGLPLTINAVLHRHNA
ERVPGMIALALEWQAERIEVAHTQYYGWGLRNRAALMPSREQLLATIDAVETARRQLGDRLAIDFVTPDYYARQPKPCMG
GWGQRFVNISPRGDVLPCHAAETIEGMRFDNLRERSLADIWNNGEAFVRFRGTAWMPEVCQGCPKREIDWGGCRCQALAL
SGDAATLDPVCERSPIHAQVRAAAEQESASPAPAFVYRRPERLAPAAADMLE
>Mature_371_residues
SIAPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLQQAADMGVLQAHFSGGEPMLRKDLPELVAHARAL
GLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADRIAGYRNSLSRKREFAAAVRARGLPLTINAVLHRHNAE
RVPGMIALALEWQAERIEVAHTQYYGWGLRNRAALMPSREQLLATIDAVETARRQLGDRLAIDFVTPDYYARQPKPCMGG
WGQRFVNISPRGDVLPCHAAETIEGMRFDNLRERSLADIWNNGEAFVRFRGTAWMPEVCQGCPKREIDWGGCRCQALALS
GDAATLDPVCERSPIHAQVRAAAEQESASPAPAFVYRRPERLAPAAADMLE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40772; Mature: 40641

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLQQAADMGVLQAHF
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
SGGEPMLRKDLPELVAHARALGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
GADRIAGYRNSLSRKREFAAAVRARGLPLTINAVLHRHNAERVPGMIALALEWQAERIEV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCEEEEEEECCHHHEEE
AHTQYYGWGLRNRAALMPSREQLLATIDAVETARRQLGDRLAIDFVTPDYYARQPKPCMG
HHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCCC
GWGQRFVNISPRGDVLPCHAAETIEGMRFDNLRERSLADIWNNGEAFVRFRGTAWMPEVC
CCCCCEEEECCCCCEEECCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHH
QGCPKREIDWGGCRCQALALSGDAATLDPVCERSPIHAQVRAAAEQESASPAPAFVYRRP
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHEECCC
ERLAPAAADMLE
HHHCCHHHHHCC
>Mature Secondary Structure 
SIAPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLQQAADMGVLQAHF
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
SGGEPMLRKDLPELVAHARALGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
GADRIAGYRNSLSRKREFAAAVRARGLPLTINAVLHRHNAERVPGMIALALEWQAERIEV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCEEEEEEECCHHHEEE
AHTQYYGWGLRNRAALMPSREQLLATIDAVETARRQLGDRLAIDFVTPDYYARQPKPCMG
HHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCCC
GWGQRFVNISPRGDVLPCHAAETIEGMRFDNLRERSLADIWNNGEAFVRFRGTAWMPEVC
CCCCCEEEECCCCCEEECCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHH
QGCPKREIDWGGCRCQALALSGDAATLDPVCERSPIHAQVRAAAEQESASPAPAFVYRRP
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCHHEECCC
ERLAPAAADMLE
HHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA