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The map label for this gene is pqqC/D

Identifier: 21243843

GI number: 21243843

Start: 3663612

End: 3663890

Strand: Direct

Name: pqqC/D

Synonym: XAC3116

Alternate gene names: 21243843

Gene position: 3663612-3663890 (Clockwise)

Preceding gene: 21243842

Following gene: 21243844

Centisome position: 70.79

GC content: 66.67

Gene sequence:

>279_bases
ATGAGCGGCATTACCCGCGATAGCCGGCCGGCGCTGCGGGCGGGCGTGCGCCTGCAACAAGACCGCGCACGCGATCAGTG
GGTGCTGCTCGCGCCCGAGCGCGTGGTCGAGCTGGACGACATCGCCTTGGTGGTCGCGCAGCGCTACGACGGCACGCGCT
CGCTGGCGCAGATCGCGCAGGAGCTGGCCGCAGAATTCGATGCGGACGCAGCGCAAATCGAAGCGGACGTGATCGAACTC
ACCGATACCCTGCATCAGAAACGTTTGCTGCGGCTATGA

Upstream 100 bases:

>100_bases
TGTGGGCGCAGCTGGATGCACTGCATGTGGCCTACGTAGCGCCAGGCATCGTCTGGCCGGATGCCTTCGTGCCGGACCGC
GACGCCAGCCGGGTCGCAGC

Downstream 100 bases:

>100_bases
GCATCGCGCCGCCACCGCTGTCGGTGTTGTTGGAGCTGACCCACCGCTGCCCGTTGGCGTGCCCGTATTGCTCCAACCCG
ATCGCGCTGGCCGCGCTGCG

Product: PqqC/D protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSGITRDSRPALRAGVRLQQDRARDQWVLLAPERVVELDDIALVVAQRYDGTRSLAQIAQELAAEFDADAAQIEADVIEL
TDTLHQKRLLRL

Sequences:

>Translated_92_residues
MSGITRDSRPALRAGVRLQQDRARDQWVLLAPERVVELDDIALVVAQRYDGTRSLAQIAQELAAEFDADAAQIEADVIEL
TDTLHQKRLLRL
>Mature_91_residues
SGITRDSRPALRAGVRLQQDRARDQWVLLAPERVVELDDIALVVAQRYDGTRSLAQIAQELAAEFDADAAQIEADVIELT
DTLHQKRLLRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQD_XANAC (Q8PHY2)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_643425.1
- GeneID:   1157187
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC3116
- NMPDR:   fig|190486.1.peg.3069
- HOGENOM:   HBG544526
- OMA:   FIREFIN
- ProtClustDB:   CLSK451644
- BioCyc:   XAXO190486:XAC3116-MONOMER
- HAMAP:   MF_00655
- InterPro:   IPR008792
- InterPro:   IPR022479
- TIGRFAMs:   TIGR03859

Pfam domain/function: PF05402 PqqD

EC number: NA

Molecular weight: Translated: 10337; Mature: 10206

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGITRDSRPALRAGVRLQQDRARDQWVLLAPERVVELDDIALVVAQRYDGTRSLAQIAQ
CCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELAAEFDADAAQIEADVIELTDTLHQKRLLRL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGITRDSRPALRAGVRLQQDRARDQWVLLAPERVVELDDIALVVAQRYDGTRSLAQIAQ
CCCCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELAAEFDADAAQIEADVIELTDTLHQKRLLRL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217