Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242430
Identifier: 21242430
GI number: 21242430
Start: 1939082
End: 1939843
Strand: Reverse
Name: 21242430
Synonym: XAC1681
Alternate gene names: NA
Gene position: 1939843-1939082 (Counterclockwise)
Preceding gene: 21242431
Following gene: 77748603
Centisome position: 37.48
GC content: 70.21
Gene sequence:
>762_bases GTGCCCGGTCGGCACCATCAAAGCCCGGCTGTTCCACGCCCGGGTCAAATTACGCAATGTGCTGCCCGGCCTGGCCGGCG GCGCCCCTTACACGGAGACCATGCAATGAAGACGTTTTTCATCGCGCCTGGCAAGGAATGCTCGCACGCCTGGGAATTGA TGCCGGCGGTGCTGCTGGACAGTGCCACCGAGGAAGAAAACACCTGGCTGATCGCGCACGTGGCCAAGTGCGCCTCGTGC AGCGCCGAATTCGCCCAGCAGAACCGCCTGCGCCAGGCCTTGGCGCTGCCGTCGACAGTGAAGCTGGACCCGAGCGCCGG TCTGCAACGCCTGCTCGGCCGCCTGGATGCACCGGAGCAGCACAGCGCGTCTGCGCGCGCGCCTGCCGCACGCCGCTCCG GCAGTTGGACGGTACGCGCCCTGGCCGCCGCCGCGCTGGTCCAGGCCATCGGGCTGGGCGTGATGGGCGTCAAGCTGGCC TCGCCTGCGCCATCGCACGACTACCGCACGCTCAGCAGCGTGGCGGCCCTGCCGGTGCCGCAGGGCGCCATCCGCGTGGT GCCGGACGCAAGGATGACCGTGGCCGACTGGGACCGGCTGCTGCATGCGCAGCAGTTGCAGGTGGTCGGCGGCCCCAACG AAATGGGCGCCTACACCGTGGTGCCTGCCGCCCCGCAGCCCCCGGCCCAACCGCAGCAGACCGTGCAGCAACTACGCGCC ACCCCAGGCATCCGGCTGGCGGAGATCGTCTCGGCCCCATGA
Upstream 100 bases:
>100_bases TGGACAAGGGCATGGAACGGTTGTCGCCGGACCAGCGCCTGGTGGTCGAACTGGTCTACGGCGTCGGCCACAAGCTCGAA GAAGTGGCCGACATCATGCA
Downstream 100 bases:
>100_bases ATCGCCTGTTCGCCATTGGCCTGATCGCCGCGTTCACCGGCCTGGGCGCGCCCTCCAACGCGCACGCTGCCGCAGCCCTG CAGGAGCCGGCGACGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPGRHHQSPAVPRPGQITQCAARPGRRRPLHGDHAMKTFFIAPGKECSHAWELMPAVLLDSATEEENTWLIAHVAKCASC SAEFAQQNRLRQALALPSTVKLDPSAGLQRLLGRLDAPEQHSASARAPAARRSGSWTVRALAAAALVQAIGLGVMGVKLA SPAPSHDYRTLSSVAALPVPQGAIRVVPDARMTVADWDRLLHAQQLQVVGGPNEMGAYTVVPAAPQPPAQPQQTVQQLRA TPGIRLAEIVSAP
Sequences:
>Translated_253_residues MPGRHHQSPAVPRPGQITQCAARPGRRRPLHGDHAMKTFFIAPGKECSHAWELMPAVLLDSATEEENTWLIAHVAKCASC SAEFAQQNRLRQALALPSTVKLDPSAGLQRLLGRLDAPEQHSASARAPAARRSGSWTVRALAAAALVQAIGLGVMGVKLA SPAPSHDYRTLSSVAALPVPQGAIRVVPDARMTVADWDRLLHAQQLQVVGGPNEMGAYTVVPAAPQPPAQPQQTVQQLRA TPGIRLAEIVSAP >Mature_252_residues PGRHHQSPAVPRPGQITQCAARPGRRRPLHGDHAMKTFFIAPGKECSHAWELMPAVLLDSATEEENTWLIAHVAKCASCS AEFAQQNRLRQALALPSTVKLDPSAGLQRLLGRLDAPEQHSASARAPAARRSGSWTVRALAAAALVQAIGLGVMGVKLAS PAPSHDYRTLSSVAALPVPQGAIRVVPDARMTVADWDRLLHAQQLQVVGGPNEMGAYTVVPAAPQPPAQPQQTVQQLRAT PGIRLAEIVSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26883; Mature: 26752
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRHHQSPAVPRPGQITQCAARPGRRRPLHGDHAMKTFFIAPGKECSHAWELMPAVLLD CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHC SATEEENTWLIAHVAKCASCSAEFAQQNRLRQALALPSTVKLDPSAGLQRLLGRLDAPEQ CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCHH HSASARAPAARRSGSWTVRALAAAALVQAIGLGVMGVKLASPAPSHDYRTLSSVAALPVP CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCC QGAIRVVPDARMTVADWDRLLHAQQLQVVGGPNEMGAYTVVPAAPQPPAQPQQTVQQLRA CCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHC TPGIRLAEIVSAP CCCCCHHHHHCCC >Mature Secondary Structure PGRHHQSPAVPRPGQITQCAARPGRRRPLHGDHAMKTFFIAPGKECSHAWELMPAVLLD CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHC SATEEENTWLIAHVAKCASCSAEFAQQNRLRQALALPSTVKLDPSAGLQRLLGRLDAPEQ CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCHH HSASARAPAARRSGSWTVRALAAAALVQAIGLGVMGVKLASPAPSHDYRTLSSVAALPVP CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHCCCC QGAIRVVPDARMTVADWDRLLHAQQLQVVGGPNEMGAYTVVPAAPQPPAQPQQTVQQLRA CCCEEECCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHC TPGIRLAEIVSAP CCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA