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The map label for this gene is ccmC [H]

Identifier: 21242428

GI number: 21242428

Start: 1936991

End: 1937749

Strand: Reverse

Name: ccmC [H]

Synonym: XAC1679

Alternate gene names: 21242428

Gene position: 1937749-1936991 (Counterclockwise)

Preceding gene: 77748603

Following gene: 21242427

Centisome position: 37.44

GC content: 64.95

Gene sequence:

>759_bases
ATGGCCAAGTGGATTCCCTTGTGGCTGCATCAACTCAGCTCGCCGCCGACCTTCTATCGTGTCGCCGGCAGCGTGCGCCC
GTGGGCGCTGGGGCTGGCCGCGCTGCTCGGCGCGGTCGCAGCCTACGGCGGCCTGGTCCTGGCACCGCCGGATTACCAGC
AGCACGATGCCTACCGCATCATCTTCATCCACGTGCCCAGTGCCTGGATGAGTCTTTTCATCTATGCGGCAATGGGCGTT
TCGGCGTTCATTGCGCTGGTGTGGCGAATCAAGCTGGCCGAAGTGGTCGCCATGGCCTCGGCGCCGATCGGTGCGGCGTT
TACCTTCATCACCCTGTGCACCGGCGCACTGTGGGGCAAGCCGATGTGGGGCACCTGGTGGACCTGGGATGCGCGGCTCA
CCTCCGAGTTGCTGCTGCTGTTCTTGTACCTGGGCGTGCTGGGCCTGTATCACGCCGTGGAAGACCGCCGCCAGGCGATG
CGCGCCGCCGGCTTGCTCGCACTGGTGGGCCTGGTGAATCTGCCCATCGTGCATTACTCGGTGGTGTGGTGGAACACGCT
GCACCAGGGGTCCACCGTGCGCCTGCTCGGCCCCTCCAAGATGAGCGCAGACATGCTGTGGCCGCTGCTGACCATGATGC
TGGCCACCAAGTGCTATTACGTTGCGAGCCTGTTCGGCCGCGTGCGTGTGGAATTGCTGGCACTGGAAAGCGGCAAGGAC
TGGGTCCGCCGCATCGTATTGACCGAGCGCACCGCATGA

Upstream 100 bases:

>100_bases
CGCACCAGCAAGGTCTCCGACGGGCAGTTGCAGGTCAACGCAGGCGCCGCAGTGCAGGCGCTGGCGCCTCCCGCCAAACA
CTCCAACTGACGGCACCGGC

Downstream 100 bases:

>100_bases
GCACCTTTCTGGCGATGGGCGGCTACGGCCAGTACGTGTGGACCGCCTACGCATTGTTCGTGCTGGCGCTGCTGGCCGAT
CTTGCAGCGCCCTGGCTGCG

Product: cytochrome C-type biogenesis protein

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAAYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGV
SAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYHAVEDRRQAM
RAAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVELLALESGKD
WVRRIVLTERTA

Sequences:

>Translated_252_residues
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAAYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGV
SAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYHAVEDRRQAM
RAAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVELLALESGKD
WVRRIVLTERTA
>Mature_251_residues
AKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAAYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGVS
AFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYHAVEDRRQAMR
AAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVELLALESGKDW
VRRIVLTERTA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=243, Percent_Identity=50.6172839506173, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28089; Mature: 27958

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAAYGGLVLAPPDYQQHDAYRI
CCCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
IFIHVPSAWMSLFIYAAMGVSAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PMWGTWWTWDARLTSELLLLFLYLGVLGLYHAVEDRRQAMRAAGLLALVGLVNLPIVHYS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVELLALESGKD
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHH
WVRRIVLTERTA
HHHHHHHHCCCC
>Mature Secondary Structure 
AKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAAYGGLVLAPPDYQQHDAYRI
CCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
IFIHVPSAWMSLFIYAAMGVSAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PMWGTWWTWDARLTSELLLLFLYLGVLGLYHAVEDRRQAMRAAGLLALVGLVNLPIVHYS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVELLALESGKD
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHH
WVRRIVLTERTA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]