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The map label for this gene is slyA [C]

Identifier: 21242417

GI number: 21242417

Start: 1924031

End: 1924495

Strand: Reverse

Name: slyA [C]

Synonym: XAC1668

Alternate gene names: 21242417

Gene position: 1924495-1924031 (Counterclockwise)

Preceding gene: 21242419

Following gene: 77748601

Centisome position: 37.18

GC content: 66.67

Gene sequence:

>465_bases
ATGCTTGATCAGAATGAACTCATCCATCCGCAGGCTGCGGTCGCGCCAGGGTACCTGGCCAACCATGCGGCGCGGGTCTT
CAACCGTCTGGTCGACGCCCAGCTGCGGCCGCACGGCGTGTCGCTGGCGCTGATCGGCCCGATCATGCTGCTGTCCTGGA
AAGGCCCGATGCTGCAACGCGACCTGGTCATCGCCTCGGCCGTGAAGCAGCCGGCCATGGTGGCGCTGCTGGACAAGCTG
GAGGGACTGAAGCTCATCAAGCGCACCCCGACCCCGCAGGATCGCCGCGCCGCGCTGGTGGCGCTCACCGCCCGCGGGCG
CAAGATTGCCGAGCTCGGTGGGCGTGCGCTGCTGGGTATGAACGCAGTGGCGCTGGAAGGCTTTTCCACCGACGAGGTGC
AGCAGACCGTCGCGTTGATGCACCGGCTGATCGCGAACATGGAGCGTCACGGGCAAGACGTGTAA

Upstream 100 bases:

>100_bases
CCAGGCTTGCGCACGTTGCCACGCGGCGCCGACCGCCATGCCGCACTGCAGGAGACGTAACATTGCCCGATGGCCCCCAG
GGCAACGCACGGTCGTCCAA

Downstream 100 bases:

>100_bases
TATCATGCCTGATATTTCCTGCCCACGGTGACTGCAATGCCGCGTCGCATCCTCATCACCGGCGCCAGCATCGCCGGCAA
CACTGCCGCCTGGACACTCG

Product: cryptic hemolysin transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLDQNELIHPQAAVAPGYLANHAARVFNRLVDAQLRPHGVSLALIGPIMLLSWKGPMLQRDLVIASAVKQPAMVALLDKL
EGLKLIKRTPTPQDRRAALVALTARGRKIAELGGRALLGMNAVALEGFSTDEVQQTVALMHRLIANMERHGQDV

Sequences:

>Translated_154_residues
MLDQNELIHPQAAVAPGYLANHAARVFNRLVDAQLRPHGVSLALIGPIMLLSWKGPMLQRDLVIASAVKQPAMVALLDKL
EGLKLIKRTPTPQDRRAALVALTARGRKIAELGGRALLGMNAVALEGFSTDEVQQTVALMHRLIANMERHGQDV
>Mature_154_residues
MLDQNELIHPQAAVAPGYLANHAARVFNRLVDAQLRPHGVSLALIGPIMLLSWKGPMLQRDLVIASAVKQPAMVALLDKL
EGLKLIKRTPTPQDRRAALVALTARGRKIAELGGRALLGMNAVALEGFSTDEVQQTVALMHRLIANMERHGQDV

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16733; Mature: 16733

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDQNELIHPQAAVAPGYLANHAARVFNRLVDAQLRPHGVSLALIGPIMLLSWKGPMLQR
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH
DLVIASAVKQPAMVALLDKLEGLKLIKRTPTPQDRRAALVALTARGRKIAELGGRALLGM
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHCCCCEECC
NAVALEGFSTDEVQQTVALMHRLIANMERHGQDV
CHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDQNELIHPQAAVAPGYLANHAARVFNRLVDAQLRPHGVSLALIGPIMLLSWKGPMLQR
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHH
DLVIASAVKQPAMVALLDKLEGLKLIKRTPTPQDRRAALVALTARGRKIAELGGRALLGM
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCHHHHHCCCCEECC
NAVALEGFSTDEVQQTVALMHRLIANMERHGQDV
CHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA