Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is acpD [H]
Identifier: 21242404
GI number: 21242404
Start: 1906474
End: 1907055
Strand: Reverse
Name: acpD [H]
Synonym: XAC1654
Alternate gene names: 21242404
Gene position: 1907055-1906474 (Counterclockwise)
Preceding gene: 21242406
Following gene: 21242402
Centisome position: 36.85
GC content: 65.46
Gene sequence:
>582_bases ATGAAACTGCTGCACCTCGATTCCAGCGCGCTCGGCGCCAATTCCATCAGCCGCGAGCTCAGTGCCGCCGTCGTGGAGCA GCAGCGCCGGCTCCATCCCGAGGTGGACGTGTCGTATCGCGACCTCGACCGCGACCCGATTCCGCATCTGACCGCGCAAA CGCTGGCGCAGACCGATCCGGCAGAGGCCGCGGCCGCCGAAGCGGTGATGCAGCAGTTCCTGCAGGCCGATGTCATCGTG ATTGGCGCACCGATGTACAACTTCGCCATCCCTTCCACGCTCAAGGCCTGGATCGATCGCATTGCAGTCGCCGGGCGCAC CTTCCAGTACACCGCCAATGGTCCGGAAGGCCTGGCCGGCGGCAAGCGCGTCATCATTGCCAGCGCGCGTGGTGGCCTGT ATGCCGATCCCACGAACGATTTTCAGGAGCCGTATCTGCGCCAGGTATTGGGCTTCCTGGGCGTCGACGACATCAGCTTC GTGCGCGCAGAAGGCGTGGCGTATTCGCCGCAGCATCGCGCCGATGCGCTGGCCTCGGCGCTGGCCGGGCTGTCTGAAGA AGAGGCTGCTGCTGGCGCGTAA
Upstream 100 bases:
>100_bases GGATAGAACGATAAGTGATATTTAATCACCTTTATTCCGACAGAGCAACGACCTAGGCTGCACACCTCCGCGGCGATGCC GCTTGCCACAGGTCACCGTC
Downstream 100 bases:
>100_bases GCGTGCGGCGTGATGCGTCGACGCATCGAAAGATCGTCATGACGGCGACATGCCGTAAACGAAAAACGGGACCAGCGCTG GTCCCGTTTTTTTTCGTCAA
Product: acyl carrier protein phosphodiesterase
Products: 4'-phosphopantetheine; apoprotein
Alternate protein names: Azo-dye reductase 1; FMN-dependent NADH-azo compound oxidoreductase 1 [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKLLHLDSSALGANSISRELSAAVVEQQRRLHPEVDVSYRDLDRDPIPHLTAQTLAQTDPAEAAAAEAVMQQFLQADVIV IGAPMYNFAIPSTLKAWIDRIAVAGRTFQYTANGPEGLAGGKRVIIASARGGLYADPTNDFQEPYLRQVLGFLGVDDISF VRAEGVAYSPQHRADALASALAGLSEEEAAAGA
Sequences:
>Translated_193_residues MKLLHLDSSALGANSISRELSAAVVEQQRRLHPEVDVSYRDLDRDPIPHLTAQTLAQTDPAEAAAAEAVMQQFLQADVIV IGAPMYNFAIPSTLKAWIDRIAVAGRTFQYTANGPEGLAGGKRVIIASARGGLYADPTNDFQEPYLRQVLGFLGVDDISF VRAEGVAYSPQHRADALASALAGLSEEEAAAGA >Mature_193_residues MKLLHLDSSALGANSISRELSAAVVEQQRRLHPEVDVSYRDLDRDPIPHLTAQTLAQTDPAEAAAAEAVMQQFLQADVIV IGAPMYNFAIPSTLKAWIDRIAVAGRTFQYTANGPEGLAGGKRVIIASARGGLYADPTNDFQEPYLRQVLGFLGVDDISF VRAEGVAYSPQHRADALASALAGLSEEEAAAGA
Specific function: Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity [H]
COG id: COG1182
COG function: function code I; Acyl carrier protein phosphodiesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the azoreductase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1787680, Length=193, Percent_Identity=41.9689119170984, Blast_Score=150, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003680 - InterPro: IPR023048 [H]
Pfam domain/function: PF02525 Flavodoxin_2 [H]
EC number: 3.1.4.14
Molecular weight: Translated: 20559; Mature: 20559
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLHLDSSALGANSISRELSAAVVEQQRRLHPEVDVSYRDLDRDPIPHLTAQTLAQTDP CEEEECCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCC AEAAAAEAVMQQFLQADVIVIGAPMYNFAIPSTLKAWIDRIAVAGRTFQYTANGPEGLAG HHHHHHHHHHHHHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC GKRVIIASARGGLYADPTNDFQEPYLRQVLGFLGVDDISFVRAEGVAYSPQHRADALASA CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHH LAGLSEEEAAAGA HHCCCHHHHCCCC >Mature Secondary Structure MKLLHLDSSALGANSISRELSAAVVEQQRRLHPEVDVSYRDLDRDPIPHLTAQTLAQTDP CEEEECCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHCCCC AEAAAAEAVMQQFLQADVIVIGAPMYNFAIPSTLKAWIDRIAVAGRTFQYTANGPEGLAG HHHHHHHHHHHHHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC GKRVIIASARGGLYADPTNDFQEPYLRQVLGFLGVDDISFVRAEGVAYSPQHRADALASA CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHH LAGLSEEEAAAGA HHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: [acyl-carrier protein]; H2O
Specific reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA