Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242348
Identifier: 21242348
GI number: 21242348
Start: 1844936
End: 1845622
Strand: Reverse
Name: 21242348
Synonym: XAC1598
Alternate gene names: NA
Gene position: 1845622-1844936 (Counterclockwise)
Preceding gene: 21242349
Following gene: 21242347
Centisome position: 35.66
GC content: 61.57
Gene sequence:
>687_bases ATGACCACCTACTTTTCCGACGCCAGCTTCAAGTTCCTGCGCGCCCTGGCCCGCCACAACGACAAGACCTGGTTCAACGA CCATCGGCATCAGTATGAAGCGCATGTGCGCCAGCCGTTCCTGCAGCTGATCACCGATCTGCAGCCTGCACTGGCACAGG TCAGCGAACACTATCGCGCCGATCCCAGGACCCAGGGCGGCTCGCTGTTCCGCATCTATCGCGATGCGCGGTTTTCCAAC GACAAATCGCCGTACAAGAACTGGCAAGGCGCGCGCCTGTTCCATGAGCGCCGCCGCCAGATGCCGGCGCCATCGTTCTA TCTCCATCTGCAGCCCGGCGAAAGTTTTGTCGGCGCCGGCCTGTGGCATCCGGAGCCGGACACGCAACGCAAGCTGCGCC AGTTCATTTTCGACAACCCCGGCAGCTGGAAGGCCGCTGCGCATAACCCGAAATTGCTGCGCAAATTCAGCCTGGACGAC AGCGAAAAACTGGTGCGGGCACCGCGCGGCTTCCCCAACGATTTCGAGTTCATCGACGATCTCAAGCACCGCAACTGGGC GTATCTGCGTCACCTGGACGACAGCATCATGACCGGGCCGCGACTGCGCCAGACCATCGAGGCGGACCTGGTGATCCTGG CGCCGTTCGTCGATTACCTGTGCGCGGCCTTGGACCTGGAATTTTGA
Upstream 100 bases:
>100_bases CGCAGATCGCGGATTTACGGGGTGCTCACCCCGACGATGCTACCAAGCAAGCCCTACTCGACCAGCTCGCCGCCTGGGGT TCGGACCTCCAACGCACGCT
Downstream 100 bases:
>100_bases TGACACAGGATCTACCGCTAGGCCAGCAGCGCCGGACGCTGGGCCGCACCAGGCTATTGGTCTCGCCGATCGGTTAGGGA TGTTCCGGCTCTTGGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTTYFSDASFKFLRALARHNDKTWFNDHRHQYEAHVRQPFLQLITDLQPALAQVSEHYRADPRTQGGSLFRIYRDARFSN DKSPYKNWQGARLFHERRRQMPAPSFYLHLQPGESFVGAGLWHPEPDTQRKLRQFIFDNPGSWKAAAHNPKLLRKFSLDD SEKLVRAPRGFPNDFEFIDDLKHRNWAYLRHLDDSIMTGPRLRQTIEADLVILAPFVDYLCAALDLEF
Sequences:
>Translated_228_residues MTTYFSDASFKFLRALARHNDKTWFNDHRHQYEAHVRQPFLQLITDLQPALAQVSEHYRADPRTQGGSLFRIYRDARFSN DKSPYKNWQGARLFHERRRQMPAPSFYLHLQPGESFVGAGLWHPEPDTQRKLRQFIFDNPGSWKAAAHNPKLLRKFSLDD SEKLVRAPRGFPNDFEFIDDLKHRNWAYLRHLDDSIMTGPRLRQTIEADLVILAPFVDYLCAALDLEF >Mature_227_residues TTYFSDASFKFLRALARHNDKTWFNDHRHQYEAHVRQPFLQLITDLQPALAQVSEHYRADPRTQGGSLFRIYRDARFSND KSPYKNWQGARLFHERRRQMPAPSFYLHLQPGESFVGAGLWHPEPDTQRKLRQFIFDNPGSWKAAAHNPKLLRKFSLDDS EKLVRAPRGFPNDFEFIDDLKHRNWAYLRHLDDSIMTGPRLRQTIEADLVILAPFVDYLCAALDLEF
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26888; Mature: 26756
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYFSDASFKFLRALARHNDKTWFNDHRHQYEAHVRQPFLQLITDLQPALAQVSEHYRA CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPRTQGGSLFRIYRDARFSNDKSPYKNWQGARLFHERRRQMPAPSFYLHLQPGESFVGAG CCCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCC LWHPEPDTQRKLRQFIFDNPGSWKAAAHNPKLLRKFSLDDSEKLVRAPRGFPNDFEFIDD CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHH LKHRNWAYLRHLDDSIMTGPRLRQTIEADLVILAPFVDYLCAALDLEF HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTYFSDASFKFLRALARHNDKTWFNDHRHQYEAHVRQPFLQLITDLQPALAQVSEHYRA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPRTQGGSLFRIYRDARFSNDKSPYKNWQGARLFHERRRQMPAPSFYLHLQPGESFVGAG CCCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCC LWHPEPDTQRKLRQFIFDNPGSWKAAAHNPKLLRKFSLDDSEKLVRAPRGFPNDFEFIDD CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHH LKHRNWAYLRHLDDSIMTGPRLRQTIEADLVILAPFVDYLCAALDLEF HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA