Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242287
Identifier: 21242287
GI number: 21242287
Start: 1776426
End: 1777355
Strand: Reverse
Name: 21242287
Synonym: XAC1536
Alternate gene names: NA
Gene position: 1777355-1776426 (Counterclockwise)
Preceding gene: 21242288
Following gene: 77748592
Centisome position: 34.34
GC content: 71.08
Gene sequence:
>930_bases ATGACCGCGCACGCCAGACCGCAGATCGTCACGCTGGACCCGGCCGCCGACGCCGCGGCGCTGCGTGCGCTGCGGCTGGC CTGCGCCACCGACACCGCTGGCGCCACCGGCGGTGTCCAGTGGGATGCATTGGACCCGCTCAGCCTGCATCTGGCCGTAC GCGCCGAGGGCCAGCTGATCGCCTCGGTGCGGCTCACCGCCGACCGCCGCCTCGACCGGCTCGGCGTTCTGTCCAACTGG CGCCGCCGTGGCGTGGCGGACCAACTGCTCGCTGCCGCAGTCGACGCGGCACGGCAGCGCGGCTGGCCTGGCCTGCGCGC ATGTCCCAGCCCTGCTGCGGAAGCGGTCTTCGCGCGCCTGGGCTTTCTGCCCGACGCTGGCACCCTCTCCTCACCCGAGC GCATTGGCCAGACCCACGATGCGCCCGGTACCGTCGTGCACCGTCGCCTCGACGGCCCGATGGCAGTGGACTCCTTCACC GCAGCCTTGGCCGCCACCACCGGGCTGCTGTGCGCCGCGCGCCGCCAGGTGCTGATCTACACCCGCGCCCTGGACCCGGC CCTGTTCGACAACGCCGCGGTGCTCGACGCGCTGCGTCGTTTCGCCACCGCCCGCCACGACAAGCGTGTACATGTCCTGG TGCAAGACACCGCCAGTGCCGCGGCCAGCAGCAGCGCGATGCTGCGCCTGGCACAGCGCCTGCCCAGCGTGTTCCGGTTC CGCGCGGTCAGCGACCCGGTCGATGCAAGTTTTGCATCGGTCTATGTTGTCGGCGACGACGCCTACTACTTTCGTCCAAC AGGTCATCGCTTCGATGATGGCGAAACCTGGCTGTCGGGCGCAGCGCGCAGCCGCCAGCTGGAGCGCGAATTCGCGCAGA TATGGGAGCGCAGCGCGCTCTGGAACGAGCCGCGCGCGCTCGGCATCTGA
Upstream 100 bases:
>100_bases ATGTCGAACCCGGCGACGATGCCGAAGCCGAGCAGGACGTCGACAGTGCGATCGCCGACGAGACCGATTCCGACGACAGC GACGACACCACCAAGCCTGC
Downstream 100 bases:
>100_bases TGCCGCAGCGCCCCTTGCACGTAGGCGCGCGCGCGATTGGTCTACCCCGTCGGTCAGCTTGCAGACGCCCCCTCACTAGC GCAAGGGGGTATAATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTAHARPQIVTLDPAADAAALRALRLACATDTAGATGGVQWDALDPLSLHLAVRAEGQLIASVRLTADRRLDRLGVLSNW RRRGVADQLLAAAVDAARQRGWPGLRACPSPAAEAVFARLGFLPDAGTLSSPERIGQTHDAPGTVVHRRLDGPMAVDSFT AALAATTGLLCAARRQVLIYTRALDPALFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASSSAMLRLAQRLPSVFRF RAVSDPVDASFASVYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSALWNEPRALGI
Sequences:
>Translated_309_residues MTAHARPQIVTLDPAADAAALRALRLACATDTAGATGGVQWDALDPLSLHLAVRAEGQLIASVRLTADRRLDRLGVLSNW RRRGVADQLLAAAVDAARQRGWPGLRACPSPAAEAVFARLGFLPDAGTLSSPERIGQTHDAPGTVVHRRLDGPMAVDSFT AALAATTGLLCAARRQVLIYTRALDPALFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASSSAMLRLAQRLPSVFRF RAVSDPVDASFASVYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSALWNEPRALGI >Mature_308_residues TAHARPQIVTLDPAADAAALRALRLACATDTAGATGGVQWDALDPLSLHLAVRAEGQLIASVRLTADRRLDRLGVLSNWR RRGVADQLLAAAVDAARQRGWPGLRACPSPAAEAVFARLGFLPDAGTLSSPERIGQTHDAPGTVVHRRLDGPMAVDSFTA ALAATTGLLCAARRQVLIYTRALDPALFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASSSAMLRLAQRLPSVFRFR AVSDPVDASFASVYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSALWNEPRALGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33322; Mature: 33191
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHARPQIVTLDPAADAAALRALRLACATDTAGATGGVQWDALDPLSLHLAVRAEGQLI CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCEEE ASVRLTADRRLDRLGVLSNWRRRGVADQLLAAAVDAARQRGWPGLRACPSPAAEAVFARL EEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH GFLPDAGTLSSPERIGQTHDAPGTVVHRRLDGPMAVDSFTAALAATTGLLCAARRQVLIY CCCCCCCCCCCHHHHCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE TRALDPALFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASSSAMLRLAQRLPSVFRF EECCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RAVSDPVDASFASVYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSAL HHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNEPRALGI CCCCCCCCC >Mature Secondary Structure TAHARPQIVTLDPAADAAALRALRLACATDTAGATGGVQWDALDPLSLHLAVRAEGQLI CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCEEE ASVRLTADRRLDRLGVLSNWRRRGVADQLLAAAVDAARQRGWPGLRACPSPAAEAVFARL EEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH GFLPDAGTLSSPERIGQTHDAPGTVVHRRLDGPMAVDSFTAALAATTGLLCAARRQVLIY CCCCCCCCCCCHHHHCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE TRALDPALFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASSSAMLRLAQRLPSVFRF EECCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RAVSDPVDASFASVYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSAL HHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WNEPRALGI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA