Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242140
Identifier: 21242140
GI number: 21242140
Start: 1594712
End: 1595161
Strand: Reverse
Name: 21242140
Synonym: XAC1387
Alternate gene names: NA
Gene position: 1595161-1594712 (Counterclockwise)
Preceding gene: 21242141
Following gene: 21242139
Centisome position: 30.82
GC content: 64.89
Gene sequence:
>450_bases ATGCGCAAGACCTTCAAGACCCTGTTGCTCGCCCTGCCGCTGGCGGCCGCTTCGTTGATGGCCCATGCGGCCGATTCGCC GGTGGGCCGCTGGACGACCATCGACGATGAAACCGGCAAGCCCAAATCGGTGGTGCAGATCGAGCAGGCCGCCAATGGCA CGCTGAGCGGAAAGGTGGTCGAGATCCTGCAGTCGTCCAAAGGGCCCAACCCGGTCTGCGACAAGTGCGATGGCGCGCTC AAGGGCAAGCCGATCAAGGGCATGACCATCTTGTGGGGCCTCAAGCCCGACGGCACCGCGGTGTGGAGCGGTGGCTCGGT ACTCGACCCGGCCAAAGGCAAGACCTACAAGTCGAAGATCACCCTCACCGACGGCGGCAAGAAGCTGCAGATGCGCGGCT ACGTCGGCATCGAAGCGCTGGGCCGGACCCAGACGTGGGTGCGCGAGTAA
Upstream 100 bases:
>100_bases GAACGCATCCCGCAGTGCATCTTTCCGCAACCATACTCCACGGTATACATTCGCGATCAGGCCGCCGACGGTGGCCCAAG CAAACCCTGGGAGGGGAACC
Downstream 100 bases:
>100_bases CCGATTCGAGAGTCGGGATTCGTAAGAGCGGGCGTCCTTCGGGGCGCCTTTTTCATGTTCGTCAGACCGAGATGCCGGTG CGCGAGTGACGCAGTGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRKTFKTLLLALPLAAASLMAHAADSPVGRWTTIDDETGKPKSVVQIEQAANGTLSGKVVEILQSSKGPNPVCDKCDGAL KGKPIKGMTILWGLKPDGTAVWSGGSVLDPAKGKTYKSKITLTDGGKKLQMRGYVGIEALGRTQTWVRE
Sequences:
>Translated_149_residues MRKTFKTLLLALPLAAASLMAHAADSPVGRWTTIDDETGKPKSVVQIEQAANGTLSGKVVEILQSSKGPNPVCDKCDGAL KGKPIKGMTILWGLKPDGTAVWSGGSVLDPAKGKTYKSKITLTDGGKKLQMRGYVGIEALGRTQTWVRE >Mature_149_residues MRKTFKTLLLALPLAAASLMAHAADSPVGRWTTIDDETGKPKSVVQIEQAANGTLSGKVVEILQSSKGPNPVCDKCDGAL KGKPIKGMTILWGLKPDGTAVWSGGSVLDPAKGKTYKSKITLTDGGKKLQMRGYVGIEALGRTQTWVRE
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15807; Mature: 15807
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTFKTLLLALPLAAASLMAHAADSPVGRWTTIDDETGKPKSVVQIEQAANGTLSGKVV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHH EILQSSKGPNPVCDKCDGALKGKPIKGMTILWGLKPDGTAVWSGGSVLDPAKGKTYKSKI HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCEECCCCCCEEEEEE TLTDGGKKLQMRGYVGIEALGRTQTWVRE EEECCCCEEEEECEECEEECCCCCHHHCC >Mature Secondary Structure MRKTFKTLLLALPLAAASLMAHAADSPVGRWTTIDDETGKPKSVVQIEQAANGTLSGKVV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCHHHH EILQSSKGPNPVCDKCDGALKGKPIKGMTILWGLKPDGTAVWSGGSVLDPAKGKTYKSKI HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCEECCCCCCEEEEEE TLTDGGKKLQMRGYVGIEALGRTQTWVRE EEECCCCEEEEECEECEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA