Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242114
Identifier: 21242114
GI number: 21242114
Start: 1568882
End: 1569385
Strand: Reverse
Name: 21242114
Synonym: XAC1361
Alternate gene names: NA
Gene position: 1569385-1568882 (Counterclockwise)
Preceding gene: 21242115
Following gene: 21242112
Centisome position: 30.32
GC content: 66.27
Gene sequence:
>504_bases GTGAGGCCGATGCACTGCATGCCTGCTGGTGGCGGATATCCGGCCGCCTCTCTCGCATGCCAGCCGCCGGCGCGATGCGG CCTATCGGCGATTGCCAGGCGAACCGCTGCTGGCATCCTGCGCATCGCACGCACGCACGCACGTGCGTTGTTGGCATTGG GTCTTTCGCCAGTTGCCACGCGCGCCCGACAGTCGCCACCTGGGCTTTCTGATCCGCAACGCCCCATCACGGCACGTGAC CTCGCCGCGGCGCGTGCGCGCGCTACCGTCGCGATTGCCAGCACGCCAACGCTGGCCAACGATGCGACATTCTCATTGCC AAGGATGAGCGCGACGCTCCTGCTCGACGCGGTTCTGCTCGGCAGCCCGGTCGTTGGCTGTGGCCTGCCAGCTACATCGG CACCGGCTGCATGGTGGCATCAGTGCATCCGCGCGATTAGCGCAACTGGCCAGCAATGCCCTATCCGCAGGTGCATTGCG CATTCGGGCAACATCGCGCATTGA
Upstream 100 bases:
>100_bases CAAGGGCTATACCGATTACCCCGCATTGCCCGAGTAATCGCCTGATCAGCCCCTGACCACGCGACCGCGCCTGCCGGCTG GCACGGCGCGGTCGCTGTGG
Downstream 100 bases:
>100_bases CTTCGCGCCAACGCACACTGCAGCGCCATTGGTCAACCGCGCTTACGCCTTGCGCAGGAAACAGGTCTTCAACACCAGGC CCTTGATCTTTTCCGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRPMHCMPAGGGYPAASLACQPPARCGLSAIARRTAAGILRIARTHARALLALGLSPVATRARQSPPGLSDPQRPITARD LAAARARATVAIASTPTLANDATFSLPRMSATLLLDAVLLGSPVVGCGLPATSAPAAWWHQCIRAISATGQQCPIRRCIA HSGNIAH
Sequences:
>Translated_167_residues MRPMHCMPAGGGYPAASLACQPPARCGLSAIARRTAAGILRIARTHARALLALGLSPVATRARQSPPGLSDPQRPITARD LAAARARATVAIASTPTLANDATFSLPRMSATLLLDAVLLGSPVVGCGLPATSAPAAWWHQCIRAISATGQQCPIRRCIA HSGNIAH >Mature_167_residues MRPMHCMPAGGGYPAASLACQPPARCGLSAIARRTAAGILRIARTHARALLALGLSPVATRARQSPPGLSDPQRPITARD LAAARARATVAIASTPTLANDATFSLPRMSATLLLDAVLLGSPVVGCGLPATSAPAAWWHQCIRAISATGQQCPIRRCIA HSGNIAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17180; Mature: 17180
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPMHCMPAGGGYPAASLACQPPARCGLSAIARRTAAGILRIARTHARALLALGLSPVAT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RARQSPPGLSDPQRPITARDLAAARARATVAIASTPTLANDATFSLPRMSATLLLDAVLL HHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH GSPVVGCGLPATSAPAAWWHQCIRAISATGQQCPIRRCIAHSGNIAH CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRPMHCMPAGGGYPAASLACQPPARCGLSAIARRTAAGILRIARTHARALLALGLSPVAT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RARQSPPGLSDPQRPITARDLAAARARATVAIASTPTLANDATFSLPRMSATLLLDAVLL HHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH GSPVVGCGLPATSAPAAWWHQCIRAISATGQQCPIRRCIAHSGNIAH CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA