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The map label for this gene is 21242109

Identifier: 21242109

GI number: 21242109

Start: 1563603

End: 1564169

Strand: Reverse

Name: 21242109

Synonym: XAC1356

Alternate gene names: NA

Gene position: 1564169-1563603 (Counterclockwise)

Preceding gene: 21242110

Following gene: 21242107

Centisome position: 30.22

GC content: 60.85

Gene sequence:

>567_bases
ATGATCCGCAGCCTGTTGCCCCACTGGAATCCGGAATGGCTGGCGATTGCGGTACCGACGGTCAAGATCGTGCTGATTCT
GGCAGTTGCCGCGTTGGTCCGCCTGCTGCTCCGGCAACTGCTGCGGCGGCTGTGCACACGCTACAGCGTGCCCGCCGAAA
TGATGATCGGTATCCGCCGCGTCGGCAGCTTCATCATTTCTATCAGTGCCTTGCTGATGGTGCTGCGGGTCATCGGCGTC
TCGGGCGGCACGTTATGGACCGCATTCACCGGGTTCGCAGCCGTCGGCGCAGTAGCCTTCTTCGCTGCATGGAGCGTACT
GTCCAATATCTTCTGCACGTTCCTGATCATCACCACGCGGCCGTTTCGCCTGCACGATCACATCGAGGTACTCGAAGGCG
GCGACAAGCCCGGCTTGAAGGGACGTGTGATCGATATCAACGTGATCTACACCACGCTGGAAGAAACCGGCGAGCGTGCC
GGCAGCGTATTGCAAGTCCCCAATAGCCTGTTTTTCCAGCGCACCACGCGTCGCTGGCGCGAGGCCGGCAGCTTCAACGC
CAACTAG

Upstream 100 bases:

>100_bases
CATTCACTCTGCGCACCTACAGCGCAGAGTTGGCCCGCTACAATGGATGCCCCTTTTGATCCTGCACGATGTGATGTCCG
CCTCCGATGCGTTGCCCGCC

Downstream 100 bases:

>100_bases
GCGCAAGGCGAAGACGCTCTGCTGCGGCCAGTTCGCCAGTGGCAGAACCCAAACACGTCGACGGCGGCAAGCGGCAAGCC
CCAACGACTACAGCAAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Small-Conductance Mechanosensitive Channel Protein; Small-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIRSLLPHWNPEWLAIAVPTVKIVLILAVAALVRLLLRQLLRRLCTRYSVPAEMMIGIRRVGSFIISISALLMVLRVIGV
SGGTLWTAFTGFAAVGAVAFFAAWSVLSNIFCTFLIITTRPFRLHDHIEVLEGGDKPGLKGRVIDINVIYTTLEETGERA
GSVLQVPNSLFFQRTTRRWREAGSFNAN

Sequences:

>Translated_188_residues
MIRSLLPHWNPEWLAIAVPTVKIVLILAVAALVRLLLRQLLRRLCTRYSVPAEMMIGIRRVGSFIISISALLMVLRVIGV
SGGTLWTAFTGFAAVGAVAFFAAWSVLSNIFCTFLIITTRPFRLHDHIEVLEGGDKPGLKGRVIDINVIYTTLEETGERA
GSVLQVPNSLFFQRTTRRWREAGSFNAN
>Mature_188_residues
MIRSLLPHWNPEWLAIAVPTVKIVLILAVAALVRLLLRQLLRRLCTRYSVPAEMMIGIRRVGSFIISISALLMVLRVIGV
SGGTLWTAFTGFAAVGAVAFFAAWSVLSNIFCTFLIITTRPFRLHDHIEVLEGGDKPGLKGRVIDINVIYTTLEETGERA
GSVLQVPNSLFFQRTTRRWREAGSFNAN

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20907; Mature: 20907

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSLLPHWNPEWLAIAVPTVKIVLILAVAALVRLLLRQLLRRLCTRYSVPAEMMIGIRR
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGSFIISISALLMVLRVIGVSGGTLWTAFTGFAAVGAVAFFAAWSVLSNIFCTFLIITTR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFRLHDHIEVLEGGDKPGLKGRVIDINVIYTTLEETGERAGSVLQVPNSLFFQRTTRRWR
CEEHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
EAGSFNAN
HCCCCCCC
>Mature Secondary Structure
MIRSLLPHWNPEWLAIAVPTVKIVLILAVAALVRLLLRQLLRRLCTRYSVPAEMMIGIRR
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGSFIISISALLMVLRVIGVSGGTLWTAFTGFAAVGAVAFFAAWSVLSNIFCTFLIITTR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFRLHDHIEVLEGGDKPGLKGRVIDINVIYTTLEETGERAGSVLQVPNSLFFQRTTRRWR
CEEHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
EAGSFNAN
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA