Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241345
Identifier: 21241345
GI number: 21241345
Start: 674800
End: 676122
Strand: Direct
Name: 21241345
Synonym: XAC0574
Alternate gene names: NA
Gene position: 674800-676122 (Clockwise)
Preceding gene: 21241344
Following gene: 21241346
Centisome position: 13.04
GC content: 64.32
Gene sequence:
>1323_bases ATGAGTATCCCGTCACCGCAATACGCCGGTTTATCCGAGGACGCCTACAAGGATCGCGCCGTTGGTCGGCGTGCACCGGG GCACGAAGAGATCGTCACGATCGAGGGTGAGCGTTACGCCGTTCTCGATCACGTCAACAATCAATCCAACGGCTACCAGG GCACGGTTTACCGCCGCGAAAGCAGTGGCGAAATCGTGGTTGCGCATCGGGGCACAGAGGGCGCGGTCAATGACGTGCTC ACCGATGCCACCATGGTCACCTCGCGGACCAATCCTCAGGCTGCCGATGCGCTTGCGCTGACCAAGAATGCGATGGACAT CGCCAAGGATGTCGGCAAGCGAACCGGCCATCAACTGGAAGTCACCGTCACCGGCCACTCGCTCGGCGGTGCGCTTGCGC AGGTGTCCGCACACCACTACGACCTCAAGGGCGAAACCTTCAACGCGTACGGCGCGTCGAGTCTGAGTTACCGCATTCCG GAGGGTGGCAATAGCGTGATCAATCACGTCATGGCATCGGACCCGGTCAGCGCGGCATCGCCGCACTTCGGGCAGGTACG CATGTATGCCAAGCCATATGAGATCGCCACCTTGAGCGGTGCCGGCTACAGCAATAGCAAGGCGAACTTCCTGATTCCGG ATTACCCGCTGGTTGCTGCCGGCGGCTCGCTCGGGGCGCACAAGCTGGGCAACTTTCTGGGCGAACATTCTGCGCTCAGG GACCCCAACGCGCGCCCGCTTGCCGAGCAGAACAAGCGCATGATCGAGGAGTACCGCAGCGATATCGATGGGCTGCGCAC CGGTACCACCATCCTCACGCGTAGCGCGCGCGGCCTCGGCCAGGACGCCATCGACGCCATCCGCGGCCCGCTCGCGCCGG GCGAGCCGGCCAAACGCGACCCACGCGAGCATGGCAACGGCCACACCTCCTTGCGGATCGATCAACCCGGACACGTGGGC AATGGCTTGTTCCAGGACGCCCAGCGCGGCGTGCATGCGCAGGACGCACGTGCCGGGCGCACGCCCGACCAGCACAGTGC GCAGTTATCGGGTTCGCTCGCATCGGAAATGCATGCCGCCGGTGGCCGGCGCATCGATGCGGTGATGATGAGCCCGGATG CCGCACGCACCTTCGCCGTGCAGGGCCGCGTCGACGACCCGGCACAGCTGCGCGTGAGCGTGGACACCATGACGGCAATG AATACTCCGCTGGAACAGAGCAGCCAACGCGTTGCCGAAAACGCGGCGCGTCAGTCGGCGGTATTGGAACAGCAACAATC GCAGACCCAGCAACAGCAGCAGGGCGCACGCGCACTGGGCTAA
Upstream 100 bases:
>100_bases AGAGTTTCCCGGACACCGGCGAGCTCAGCCCGGAGACGTTCAAGCCTGAGATCCGCGACAATCTCTTCACCATCACGCTG GCTGCCAAGGAAGTTGCGTC
Downstream 100 bases:
>100_bases GGGGAGCGGGGCATGGAGCTGCCGCGTTTGCGTGCAGTGACACACCCGGCTGCCGCCCATGCCACCCATGCCACACGCCG CCCGGACTGCACATCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSIPSPQYAGLSEDAYKDRAVGRRAPGHEEIVTIEGERYAVLDHVNNQSNGYQGTVYRRESSGEIVVAHRGTEGAVNDVL TDATMVTSRTNPQAADALALTKNAMDIAKDVGKRTGHQLEVTVTGHSLGGALAQVSAHHYDLKGETFNAYGASSLSYRIP EGGNSVINHVMASDPVSAASPHFGQVRMYAKPYEIATLSGAGYSNSKANFLIPDYPLVAAGGSLGAHKLGNFLGEHSALR DPNARPLAEQNKRMIEEYRSDIDGLRTGTTILTRSARGLGQDAIDAIRGPLAPGEPAKRDPREHGNGHTSLRIDQPGHVG NGLFQDAQRGVHAQDARAGRTPDQHSAQLSGSLASEMHAAGGRRIDAVMMSPDAARTFAVQGRVDDPAQLRVSVDTMTAM NTPLEQSSQRVAENAARQSAVLEQQQSQTQQQQQGARALG
Sequences:
>Translated_440_residues MSIPSPQYAGLSEDAYKDRAVGRRAPGHEEIVTIEGERYAVLDHVNNQSNGYQGTVYRRESSGEIVVAHRGTEGAVNDVL TDATMVTSRTNPQAADALALTKNAMDIAKDVGKRTGHQLEVTVTGHSLGGALAQVSAHHYDLKGETFNAYGASSLSYRIP EGGNSVINHVMASDPVSAASPHFGQVRMYAKPYEIATLSGAGYSNSKANFLIPDYPLVAAGGSLGAHKLGNFLGEHSALR DPNARPLAEQNKRMIEEYRSDIDGLRTGTTILTRSARGLGQDAIDAIRGPLAPGEPAKRDPREHGNGHTSLRIDQPGHVG NGLFQDAQRGVHAQDARAGRTPDQHSAQLSGSLASEMHAAGGRRIDAVMMSPDAARTFAVQGRVDDPAQLRVSVDTMTAM NTPLEQSSQRVAENAARQSAVLEQQQSQTQQQQQGARALG >Mature_439_residues SIPSPQYAGLSEDAYKDRAVGRRAPGHEEIVTIEGERYAVLDHVNNQSNGYQGTVYRRESSGEIVVAHRGTEGAVNDVLT DATMVTSRTNPQAADALALTKNAMDIAKDVGKRTGHQLEVTVTGHSLGGALAQVSAHHYDLKGETFNAYGASSLSYRIPE GGNSVINHVMASDPVSAASPHFGQVRMYAKPYEIATLSGAGYSNSKANFLIPDYPLVAAGGSLGAHKLGNFLGEHSALRD PNARPLAEQNKRMIEEYRSDIDGLRTGTTILTRSARGLGQDAIDAIRGPLAPGEPAKRDPREHGNGHTSLRIDQPGHVGN GLFQDAQRGVHAQDARAGRTPDQHSAQLSGSLASEMHAAGGRRIDAVMMSPDAARTFAVQGRVDDPAQLRVSVDTMTAMN TPLEQSSQRVAENAARQSAVLEQQQSQTQQQQQGARALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46862; Mature: 46731
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPSPQYAGLSEDAYKDRAVGRRAPGHEEIVTIEGERYAVLDHVNNQSNGYQGTVYRRE CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEC SSGEIVVAHRGTEGAVNDVLTDATMVTSRTNPQAADALALTKNAMDIAKDVGKRTGHQLE CCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE VTVTGHSLGGALAQVSAHHYDLKGETFNAYGASSLSYRIPEGGNSVINHVMASDPVSAAS EEEECCCHHHHHHHHHHHEEECCCCEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCC PHFGQVRMYAKPYEIATLSGAGYSNSKANFLIPDYPLVAAGGSLGAHKLGNFLGEHSALR CCCCEEEEEECCEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHHHHCC DPNARPLAEQNKRMIEEYRSDIDGLRTGTTILTRSARGLGQDAIDAIRGPLAPGEPAKRD CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCC PREHGNGHTSLRIDQPGHVGNGLFQDAQRGVHAQDARAGRTPDQHSAQLSGSLASEMHAA CHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GGRRIDAVMMSPDAARTFAVQGRVDDPAQLRVSVDTMTAMNTPLEQSSQRVAENAARQSA CCCEEEEEEECCCCCEEEEEECCCCCCHHEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHH VLEQQQSQTQQQQQGARALG HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIPSPQYAGLSEDAYKDRAVGRRAPGHEEIVTIEGERYAVLDHVNNQSNGYQGTVYRRE CCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEC SSGEIVVAHRGTEGAVNDVLTDATMVTSRTNPQAADALALTKNAMDIAKDVGKRTGHQLE CCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE VTVTGHSLGGALAQVSAHHYDLKGETFNAYGASSLSYRIPEGGNSVINHVMASDPVSAAS EEEECCCHHHHHHHHHHHEEECCCCEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCC PHFGQVRMYAKPYEIATLSGAGYSNSKANFLIPDYPLVAAGGSLGAHKLGNFLGEHSALR CCCCEEEEEECCEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCHHHHHHHHHHHHHCC DPNARPLAEQNKRMIEEYRSDIDGLRTGTTILTRSARGLGQDAIDAIRGPLAPGEPAKRD CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCC PREHGNGHTSLRIDQPGHVGNGLFQDAQRGVHAQDARAGRTPDQHSAQLSGSLASEMHAA CHHCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GGRRIDAVMMSPDAARTFAVQGRVDDPAQLRVSVDTMTAMNTPLEQSSQRVAENAARQSA CCCEEEEEEECCCCCEEEEEECCCCCCHHEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHH VLEQQQSQTQQQQQGARALG HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA