Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is catD [H]
Identifier: 21241144
GI number: 21241144
Start: 440874
End: 441656
Strand: Direct
Name: catD [H]
Synonym: XAC0370
Alternate gene names: 21241144
Gene position: 440874-441656 (Clockwise)
Preceding gene: 21241143
Following gene: 21241145
Centisome position: 8.52
GC content: 68.33
Gene sequence:
>783_bases ATGGCTTATCTCCAGTTGCCCACGCATCGCCTGCATTACCGCCTGGACGGCACCGAAGGACGCCCCTGGCTGACCTTCTG CAATTCGCTGGGCACCGATCTGCACATGTGGGACGTGCAACTCGAAGCCTTCGCTCCGCACTACCGCATCCTGCGCTACG ACCGCCGCGGCCACGGGTATTCGGAGACGCCGCCCGGCCCGTACAGCGTCGCCGACCTGGGTCAGGACGTGCTGACACTG TGGGACGCCCTGGAGATCGCGCAGAGCGATTTCTGCGGCCTGTCGATCGGCGGGCTCACCGGGCAGTGGCTGGGCCTGCA GGCACCGCAGCGCTTGCGCCGGCTGGTGGTGTGCGCCACCGCGCAGAAAATCGGCAGCGCCGCCACCTGGGAAACCCGCA TCGAACAGGTGCGCAGCGAAGGCCTTCCGACGCTGATCGATGCCACGCTGCAACGCTGGTTTACCCCCGAATTCGCCACC AGCCACGCGCAGCGCCTGGACATGATCGCCGCTGCCTTCGTCTCCACTTCGCCGGCCGGCTACATCGCCTGCTGCCAGGC GGTGGCCGATGCGGATTTCCGCGGTGCACTGGACGGGCTGAGCCTGCCGCTGCTGGCGCTGGCGGGCGACGACGACCCGG TGTGCCCGCCGCCTGACCTGCGCGAGATCGCCTATGCCGCGCCGGACGGTCATTACGCCCAGGTGCCCGGCCGCCACATC TGCAACCTGGAGTCGCCGGCCGCGTTCAACCACGCGGTGCTCGGTTTTCTTCAGGGCCAGTGA
Upstream 100 bases:
>100_bases CAACTCCAGGCAGTGTTCGATAGCGCTAGTTGGCACGGTATGTCCTCGGTCTGGATCGACCGCGTGCTGGCTGGATCTTC TTCCCGTTGACGGTGCTTCG
Downstream 100 bases:
>100_bases GCTTTCCCACCTTGCAAGGACACCCCATGCACGAAGACGAACGGTATCAAGCCGGCATGCGTGAACGCCGCCGCGTCCTT GGCGATGCGCATGTCGACCG
Product: b-ketoadipate enol-lactone hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAYLQLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHMWDVQLEAFAPHYRILRYDRRGHGYSETPPGPYSVADLGQDVLTL WDALEIAQSDFCGLSIGGLTGQWLGLQAPQRLRRLVVCATAQKIGSAATWETRIEQVRSEGLPTLIDATLQRWFTPEFAT SHAQRLDMIAAAFVSTSPAGYIACCQAVADADFRGALDGLSLPLLALAGDDDPVCPPPDLREIAYAAPDGHYAQVPGRHI CNLESPAAFNHAVLGFLQGQ
Sequences:
>Translated_260_residues MAYLQLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHMWDVQLEAFAPHYRILRYDRRGHGYSETPPGPYSVADLGQDVLTL WDALEIAQSDFCGLSIGGLTGQWLGLQAPQRLRRLVVCATAQKIGSAATWETRIEQVRSEGLPTLIDATLQRWFTPEFAT SHAQRLDMIAAAFVSTSPAGYIACCQAVADADFRGALDGLSLPLLALAGDDDPVCPPPDLREIAYAAPDGHYAQVPGRHI CNLESPAAFNHAVLGFLQGQ >Mature_259_residues AYLQLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHMWDVQLEAFAPHYRILRYDRRGHGYSETPPGPYSVADLGQDVLTLW DALEIAQSDFCGLSIGGLTGQWLGLQAPQRLRRLVVCATAQKIGSAATWETRIEQVRSEGLPTLIDATLQRWFTPEFATS HAQRLDMIAAAFVSTSPAGYIACCQAVADADFRGALDGLSLPLLALAGDDDPVCPPPDLREIAYAAPDGHYAQVPGRHIC NLESPAAFNHAVLGFLQGQ
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=236, Percent_Identity=24.5762711864407, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28485; Mature: 28353
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLQLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHMWDVQLEAFAPHYRILRYDRRGHGY CCEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEECCCCCCC SETPPGPYSVADLGQDVLTLWDALEIAQSDFCGLSIGGLTGQWLGLQAPQRLRRLVVCAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH AQKIGSAATWETRIEQVRSEGLPTLIDATLQRWFTPEFATSHAQRLDMIAAAFVSTSPAG HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH YIACCQAVADADFRGALDGLSLPLLALAGDDDPVCPPPDLREIAYAAPDGHYAQVPGRHI HHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCEECCCCCEE CNLESPAAFNHAVLGFLQGQ CCCCCCCHHHHHHHHEECCC >Mature Secondary Structure AYLQLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHMWDVQLEAFAPHYRILRYDRRGHGY CEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEECCCCCCC SETPPGPYSVADLGQDVLTLWDALEIAQSDFCGLSIGGLTGQWLGLQAPQRLRRLVVCAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH AQKIGSAATWETRIEQVRSEGLPTLIDATLQRWFTPEFATSHAQRLDMIAAAFVSTSPAG HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH YIACCQAVADADFRGALDGLSLPLLALAGDDDPVCPPPDLREIAYAAPDGHYAQVPGRHI HHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCEECCCCCEE CNLESPAAFNHAVLGFLQGQ CCCCCCCHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]