Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241045
Identifier: 21241045
GI number: 21241045
Start: 324868
End: 325332
Strand: Reverse
Name: 21241045
Synonym: XAC0271
Alternate gene names: NA
Gene position: 325332-324868 (Counterclockwise)
Preceding gene: 21241046
Following gene: 21241044
Centisome position: 6.29
GC content: 69.03
Gene sequence:
>465_bases ATGGAACAAGCACCGCCGCTGCGTCGCGGCGATGCCTGGCTTGCGCGTCCTACGCCCCACGCGGTGGCCACATGCGTTTG CCGTCCCACCCGGTTTGGCAACGGTGCGCTGCGGTGTGGCAGGTGCGCCACGTCCATCGCGCGCGGTGGCGTGATGTCCA GCGCATCGCCCTTGCCGCTTGCCTGGTTCAGGCGCCCCTGGCTGGGGGTGCTTGCGCGCACGCTGGCAGCCATCTTCGGC GGCTACGCGCTGGCCAGCGCCACCAATCTGTTGTTGGCGCTGGTGTTGCCGATGCCGCGCAGTGAAGCGGTATTGAGCAG CATGCTGATCGGGATCGTAGTGTGCGCGTGTGCGCCGTTATGGGCCTTCGCCACCGCCAGCGTGTGGCGTGCCTGTGCCG GCATCGCGGTGCCGGCGACGCTGATGTTTGCGCTGGCCGCGTGGCTGCAACGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases AAGCGCGAGATCGCCGGCAAGCAGGTGTCGATGGTGCACCACATCAGCACGCTGACGTTCCTGGCCGAATAAGCGTGGTC GGCACACCTCCCGCGCACTC
Downstream 100 bases:
>100_bases AGCAGGGCTTTCGCCAGTCGATGGCGTGGCTGCATACCTGGACCGGGCTGCTGGTCGGCTGGGTCTTGCTGCTGATCTTC ATGGGCGGCACGGCCAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MEQAPPLRRGDAWLARPTPHAVATCVCRPTRFGNGALRCGRCATSIARGGVMSSASPLPLAWFRRPWLGVLARTLAAIFG GYALASATNLLLALVLPMPRSEAVLSSMLIGIVVCACAPLWAFATASVWRACAGIAVPATLMFALAAWLQRSAA
Sequences:
>Translated_154_residues MEQAPPLRRGDAWLARPTPHAVATCVCRPTRFGNGALRCGRCATSIARGGVMSSASPLPLAWFRRPWLGVLARTLAAIFG GYALASATNLLLALVLPMPRSEAVLSSMLIGIVVCACAPLWAFATASVWRACAGIAVPATLMFALAAWLQRSAA >Mature_154_residues MEQAPPLRRGDAWLARPTPHAVATCVCRPTRFGNGALRCGRCATSIARGGVMSSASPLPLAWFRRPWLGVLARTLAAIFG GYALASATNLLLALVLPMPRSEAVLSSMLIGIVVCACAPLWAFATASVWRACAGIAVPATLMFALAAWLQRSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16161; Mature: 16161
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAPPLRRGDAWLARPTPHAVATCVCRPTRFGNGALRCGRCATSIARGGVMSSASPLPL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH AWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLSSMLIGIVVCACAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH WAFATASVWRACAGIAVPATLMFALAAWLQRSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQAPPLRRGDAWLARPTPHAVATCVCRPTRFGNGALRCGRCATSIARGGVMSSASPLPL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH AWFRRPWLGVLARTLAAIFGGYALASATNLLLALVLPMPRSEAVLSSMLIGIVVCACAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH WAFATASVWRACAGIAVPATLMFALAAWLQRSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA