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The map label for this gene is yaeJ [C]

Identifier: 21241020

GI number: 21241020

Start: 293853

End: 294284

Strand: Direct

Name: yaeJ [C]

Synonym: XAC0246

Alternate gene names: 21241020

Gene position: 293853-294284 (Clockwise)

Preceding gene: 21241018

Following gene: 21241021

Centisome position: 5.68

GC content: 68.06

Gene sequence:

>432_bases
ATGGCCAGCGACCCGATCCAGATCACCCCCAGCCTGACGATTCCGCCCAGCGAACTCGTCGAGCGCTTCGTGCGTGCCAG
CGGCGCGGGCGGGCAGAACGTCAACAAGGTGTCCACTGCGGTGGAGCTGCGTTTCGACGTGGCGGGGTCGCCCTCGTTGC
CTGAGCCCTTGCGGGCCCGGTTGCTGTCGCGGCGCGACCGCCGCATGACGGCCGACGGTGTGCTGGTGATCGACGCGCAA
CGCTTCCGCACCCAGGACCGCAACCGCGACGATGCGCGCGAGCGACTGGTCGAAATCATCAGTGCGTGCCTGTCGGTGCC
CAAGCGCCGGGTCGCCACCAAACCGAGTCATGGTGCCAAGCTGCGGCGGCTGGATGCCAAGCGGGAACGCAGCCAAATCA
AGCGTGGACGCTCGGCGTCCCACTGGGAGTAA

Upstream 100 bases:

>100_bases
GGTGTCATCGGAGCATCCTGCAAACGGGGGACCGGCCGCAGCATACGGGAAGCCGGCGTTCGCGCGCGCGTCCACGCCGC
TGCCGATACAATCGGCGCTC

Downstream 100 bases:

>100_bases
GCGTGAGTCAAGCCGACCCGTCGTTGCCACCGGTAACACAGGCCAACATCCTGCTGCAGCCATCTCCGCCCCGGATGCCA
CGCGCCCATGGCCGCTTCAT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MASDPIQITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDRRMTADGVLVIDAQ
RFRTQDRNRDDARERLVEIISACLSVPKRRVATKPSHGAKLRRLDAKRERSQIKRGRSASHWE

Sequences:

>Translated_143_residues
MASDPIQITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDRRMTADGVLVIDAQ
RFRTQDRNRDDARERLVEIISACLSVPKRRVATKPSHGAKLRRLDAKRERSQIKRGRSASHWE
>Mature_142_residues
ASDPIQITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDRRMTADGVLVIDAQR
FRTQDRNRDDARERLVEIISACLSVPKRRVATKPSHGAKLRRLDAKRERSQIKRGRSASHWE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Homo sapiens, GI4557657, Length=129, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=6e-11,
Organism=Escherichia coli, GI1786389, Length=129, Percent_Identity=44.9612403100775, Blast_Score=104, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19921098, Length=130, Percent_Identity=39.2307692307692, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16034; Mature: 15902

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDPIQITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRAR
CCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHH
LLSRRDRRMTADGVLVIDAQRFRTQDRNRDDARERLVEIISACLSVPKRRVATKPSHGAK
HHHHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHH
LRRLDAKRERSQIKRGRSASHWE
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ASDPIQITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRAR
CCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCCHHHHHH
LLSRRDRRMTADGVLVIDAQRFRTQDRNRDDARERLVEIISACLSVPKRRVATKPSHGAK
HHHHHHCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHH
LRRLDAKRERSQIKRGRSASHWE
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]